RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 GRIN1Q05586 938 aa24.96■■□□□ 1.59
U2AF1-202ENST00000380276 WDR44Q5JSH3 913 aa24.96■■□□□ 1.59
U2AF1-202ENST00000380276 SLFN12LQ6IEE8 588 aa24.96■■□□□ 1.59
U2AF1-202ENST00000380276 KRI1Q8N9T8 703 aaKnown RBP24.96■■□□□ 1.59
U2AF1-202ENST00000380276 LARP4BQ92615 738 aaKnown RBP24.96■■□□□ 1.59
U2AF1-202ENST00000380276 SEMA4GQ9NTN9 838 aa24.96■■□□□ 1.59
U2AF1-202ENST00000380276 TCHHQ07283 1943 aa24.96■■□□□ 1.59
U2AF1-202ENST00000380276 K7ESF4 209 aa24.95■■□□□ 1.58
U2AF1-202ENST00000380276 BMP15O95972 392 aa24.95■■□□□ 1.58
U2AF1-202ENST00000380276 CNR2P34972 360 aa24.95■■□□□ 1.58
U2AF1-202ENST00000380276 LONP1P36776 959 aaKnown RBP24.95■■□□□ 1.58
U2AF1-202ENST00000380276 MCM2P49736 904 aa24.95■■□□□ 1.58
U2AF1-202ENST00000380276 ITPRIPL2Q3MIP1 535 aa24.95■■□□□ 1.58
U2AF1-202ENST00000380276 WSCD1Q658N2 575 aa24.95■■□□□ 1.58
U2AF1-202ENST00000380276 LARP1BQ659C4 914 aaKnown RBP24.95■■□□□ 1.58
U2AF1-202ENST00000380276 SPPL2BQ8TCT7 592 aa24.95■■□□□ 1.58
U2AF1-202ENST00000380276 NETO1Q8TDF5 533 aa24.95■■□□□ 1.58
U2AF1-202ENST00000380276 POMGNT1Q8WZA1 660 aa24.95■■□□□ 1.58
U2AF1-202ENST00000380276 C2orf42Q9NWW7 574 aa24.95■■□□□ 1.58
U2AF1-202ENST00000380276 C2CD2Q9Y426 696 aa24.95■■□□□ 1.58
U2AF1-202ENST00000380276 KIF26AQ9ULI4 1882 aaPredicted RBP24.95■■□□□ 1.58
U2AF1-202ENST00000380276 PTPAQ15257 358 aa24.94■■□□□ 1.58
U2AF1-202ENST00000380276 SV2CQ496J9 727 aa24.94■■□□□ 1.58
U2AF1-202ENST00000380276 DYMQ7RTS9 669 aa24.94■■□□□ 1.58
U2AF1-202ENST00000380276 DCP1BQ8IZD4 617 aaKnown RBP24.94■■□□□ 1.58
U2AF1-202ENST00000380276 FIZ1Q96SL8 496 aa24.94■■□□□ 1.58
U2AF1-202ENST00000380276 IL21Q9HBE4 155 aa24.94■■□□□ 1.58
U2AF1-202ENST00000380276 MAGED2Q9UNF1 606 aaPredicted RBP24.94■■□□□ 1.58
U2AF1-202ENST00000380276 LRP3O75074 770 aa24.93■■□□□ 1.58
U2AF1-202ENST00000380276 HAPLN1P10915 354 aaPredicted RBP24.93■■□□□ 1.58
U2AF1-202ENST00000380276 AVPR1AP37288 418 aa24.93■■□□□ 1.58
U2AF1-202ENST00000380276 BFSP1Q12934 665 aa24.93■■□□□ 1.58
U2AF1-202ENST00000380276 SF3A1Q15459 793 aaKnown RBP24.93■■□□□ 1.58
U2AF1-202ENST00000380276 PRR23CQ6ZRP0 262 aa24.93■■□□□ 1.58
U2AF1-202ENST00000380276 MAB21L3Q8N8X9 362 aa24.93■■□□□ 1.58
U2AF1-202ENST00000380276 TTC16Q8NEE8 873 aa24.93■■□□□ 1.58
U2AF1-202ENST00000380276 C2orf15Q8WU43 125 aaKnown RBP24.93■■□□□ 1.58
U2AF1-202ENST00000380276 ZNF560Q96MR9 790 aa24.93■■□□□ 1.58
U2AF1-202ENST00000380276 SLC46A2Q9BY10 475 aa24.93■■□□□ 1.58
U2AF1-202ENST00000380276 IKZF4Q9H2S9 585 aa24.93■■□□□ 1.58
U2AF1-202ENST00000380276 GKN1Q9NS71 199 aa24.93■■□□□ 1.58
U2AF1-202ENST00000380276 SCN1AP35498 2009 aa24.93■■□□□ 1.58
U2AF1-202ENST00000380276 PAPSS2O95340 614 aaPredicted RBP24.92■■□□□ 1.58
U2AF1-202ENST00000380276 CD2BP2O95400 341 aaKnown RBP24.92■■□□□ 1.58
U2AF1-202ENST00000380276 HOXC13P31276 330 aa24.92■■□□□ 1.58
U2AF1-202ENST00000380276 TSPY1Q01534 308 aa24.92■■□□□ 1.58
U2AF1-202ENST00000380276 SMARCB1Q12824 385 aa24.92■■□□□ 1.58
U2AF1-202ENST00000380276 LRRTM3Q86VH5 581 aa24.92■■□□□ 1.58
U2AF1-202ENST00000380276 SFR1Q86XK3 245 aa24.92■■□□□ 1.58
U2AF1-202ENST00000380276 EFCAB13Q8IY85 973 aa24.92■■□□□ 1.58
U2AF1-202ENST00000380276 STKLD1Q8NE28 680 aa24.92■■□□□ 1.58
U2AF1-202ENST00000380276 NOC3LQ8WTT2 800 aaKnown RBP24.92■■□□□ 1.58
U2AF1-202ENST00000380276 PI4K2AQ9BTU6 479 aa24.92■■□□□ 1.58
U2AF1-202ENST00000380276 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.92■■□□□ 1.58
U2AF1-202ENST00000380276 PCDHB5Q9Y5E4 795 aa24.92■■□□□ 1.58
U2AF1-202ENST00000380276 KPNA7A9QM74 516 aa24.91■■□□□ 1.58
U2AF1-202ENST00000380276 PRPF40AO75400 957 aaKnown RBP24.91■■□□□ 1.58
U2AF1-202ENST00000380276 PXNP49023 591 aaPredicted RBP24.91■■□□□ 1.58
U2AF1-202ENST00000380276 GPR15P49685 360 aa24.91■■□□□ 1.58
U2AF1-202ENST00000380276 CCINQ13939 588 aa24.91■■□□□ 1.58
U2AF1-202ENST00000380276 CSRP2Q16527 193 aa24.91■■□□□ 1.58
U2AF1-202ENST00000380276 PPM1JQ5JR12 505 aa24.91■■□□□ 1.58
U2AF1-202ENST00000380276 TRIM68Q6AZZ1 485 aa24.91■■□□□ 1.58
U2AF1-202ENST00000380276 WDR5BQ86VZ2 330 aa24.91■■□□□ 1.58
U2AF1-202ENST00000380276 CMTM8Q8IZV2 173 aa24.91■■□□□ 1.58
U2AF1-202ENST00000380276 SYNPOQ8N3V7 929 aa24.91■■□□□ 1.58
U2AF1-202ENST00000380276 FAM160A2Q8N612 972 aaPredicted RBP24.91■■□□□ 1.58
U2AF1-202ENST00000380276 SLC30A4O14863 429 aa24.9■■□□□ 1.58
U2AF1-202ENST00000380276 EXTL3O43909 919 aa24.9■■□□□ 1.58
U2AF1-202ENST00000380276 WEE1P30291 646 aa24.9■■□□□ 1.58
U2AF1-202ENST00000380276 TFAMQ00059 246 aaKnown RBP24.9■■□□□ 1.58
U2AF1-202ENST00000380276 GRSF1Q12849 480 aaKnown RBP eCLIP24.9■■□□□ 1.58
U2AF1-202ENST00000380276 CC2D1AQ6P1N0 951 aaPredicted RBP24.9■■□□□ 1.58
U2AF1-202ENST00000380276 BRAPQ7Z569 592 aa24.9■■□□□ 1.58
U2AF1-202ENST00000380276 MRPS31Q92665 395 aaKnown RBP24.9■■□□□ 1.58
U2AF1-202ENST00000380276 FAM213AQ9BRX8 229 aa24.9■■□□□ 1.58
U2AF1-202ENST00000380276 EBF3Q9H4W6 596 aa24.9■■□□□ 1.58
U2AF1-202ENST00000380276 MRPL44Q9H9J2 332 aaKnown RBP24.9■■□□□ 1.58
U2AF1-202ENST00000380276 TBC1D7Q9P0N9 293 aa24.9■■□□□ 1.58
U2AF1-202ENST00000380276 SLC8A2Q9UPR5 921 aa24.9■■□□□ 1.58
U2AF1-202ENST00000380276 VPS37CA5D8V6 355 aaPredicted RBP24.89■■□□□ 1.58
U2AF1-202ENST00000380276 AXIN1O15169 862 aa24.89■■□□□ 1.58
U2AF1-202ENST00000380276 GDF9O60383 454 aa24.89■■□□□ 1.58
U2AF1-202ENST00000380276 IL18RAPO95256 599 aa24.89■■□□□ 1.58
U2AF1-202ENST00000380276 POLR2BP30876 1174 aaKnown RBP24.89■■□□□ 1.58
U2AF1-202ENST00000380276 DDIT3P35638 169 aa24.89■■□□□ 1.58
U2AF1-202ENST00000380276 NLRP12P59046 1061 aa24.89■■□□□ 1.58
U2AF1-202ENST00000380276 RUNX3Q13761 415 aa24.89■■□□□ 1.58
U2AF1-202ENST00000380276 POSTNQ15063 836 aa24.89■■□□□ 1.58
U2AF1-202ENST00000380276 AASDHQ4L235 1098 aaPredicted RBP24.89■■□□□ 1.58
U2AF1-202ENST00000380276 SDHAF4Q5VUM1 108 aa24.89■■□□□ 1.58
U2AF1-202ENST00000380276 UPF2Q9HAU5 1272 aaKnown RBP24.89■■□□□ 1.58
U2AF1-202ENST00000380276 TMLHEQ9NVH6 421 aa24.89■■□□□ 1.58
U2AF1-202ENST00000380276 CCDC39Q9UFE4 941 aa24.89■■□□□ 1.58
U2AF1-202ENST00000380276 ZMYM5Q9UJ78 669 aa24.89■■□□□ 1.58
U2AF1-202ENST00000380276 EXOC7Q9UPT5 735 aa24.89■■□□□ 1.58
U2AF1-202ENST00000380276 CCL26Q9Y258 94 aa24.89■■□□□ 1.58
U2AF1-202ENST00000380276 CCDC192P0DO97 292 aa24.88■■□□□ 1.57
U2AF1-202ENST00000380276 DDX6P26196 483 aaKnown RBP eCLIP24.88■■□□□ 1.57
U2AF1-202ENST00000380276 PNPLA4P41247 253 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms