RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 PSMC2P35998 433 aaKnown RBP8.24□□□□□ -1.09
CDKL5-202ENST00000379996 NLRP11P59045 1033 aaKnown RBP8.24□□□□□ -1.09
CDKL5-202ENST00000379996 PRPF4BQ13523 1007 aaKnown RBP8.24□□□□□ -1.09
CDKL5-202ENST00000379996 DSC3Q14574 896 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 TUBB8Q3ZCM7 444 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 XKR4Q5GH76 650 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 FBXO47Q5MNV8 452 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 C11orf63Q6NUN7 778 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 KSR1Q8IVT5 923 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 RFFLQ8WZ73 363 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 APBB2Q92870 758 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 PDZD7Q9H5P4 517 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 APEX2Q9UBZ4 518 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 TBX21Q9UL17 535 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 PLAAQ9Y263 795 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 CDY2AQ9Y6F7 541 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 ANKRD63C9JTQ0 380 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 KIAA0355O15063 1070 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 GPR182O15218 404 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 P4HA2O15460 535 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 LRRN2O75325 713 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 CHRNB2P17787 502 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 CTNNA2P26232 953 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 PEX5P50542 639 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 TNNC1P63316 161 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 ARID5AQ03989 594 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 PDCLQ13371 301 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 TUSC1Q2TAM9 212 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 ATF7IP2Q5U623 682 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 INTS8Q75QN2 995 aaKnown RBP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 ZBTB33Q86T24 672 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 DDX42Q86XP3 938 aaKnown RBP eCLIP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 NT5DC4Q86YG4 428 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 ANKMY2Q8IV38 441 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 C10orf67Q8IYJ2 551 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 FAM186BQ8IYM0 893 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 GPD1LQ8N335 351 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 XXYLT1Q8NBI6 393 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 SLC35G2Q8TBE7 412 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 ALG3Q92685 438 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 KIFC3Q9BVG8 833 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 HAPLN2Q9GZV7 340 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 INTS2Q9H0H0 1204 aaKnown RBP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 ADAM7Q9H2U9 754 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 TRMT13Q9NUP7 481 aaKnown RBP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 HSPBP1Q9NZL4 362 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 CNOT8Q9UFF9 292 aaKnown RBP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 VPS9D1Q9Y2B5 631 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 DERAQ9Y315 318 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 SELPP16109 830 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 LIG4P49917 911 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 NAP1L1P55209 391 aaKnown RBP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 DLG4P78352 724 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 SURF1Q15526 300 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 CYP1B1Q16678 543 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 DNAJC21Q5F1R6 531 aaKnown RBP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 NAA35Q5VZE5 725 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 NECAB2Q7Z6G3 386 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 NLRP4Q96MN2 994 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 CARD9Q9H257 536 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 PLEKHA5Q9HAU0 1116 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 POLD4Q9HCU8 107 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 GRHL1Q9NZI5 618 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 CPSF3Q9UKF6 684 aaKnown RBP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 SRGAP2CP0DJJ0 459 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 NR1D1P20393 614 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 MDH1P40925 334 aaKnown RBP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 GRM5P41594 1212 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 CCT5P48643 541 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 RAB27AP51159 221 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 AP3M2P53677 418 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 FAAP100Q0VG06 881 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 BFSP1Q12934 665 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 DRAP1Q14919 205 aaPredicted RBP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 PSMD6Q15008 389 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 UBAP2Q5T6F2 1119 aaKnown RBP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 AGBL2Q5U5Z8 902 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 PTCRAQ6ISU1 281 aaPredicted RBP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 NOTUMQ6P988 496 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 CRELD2Q6UXH1 353 aaPredicted RBP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 MRPL10Q7Z7H8 261 aaKnown RBP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 TADA2BQ86TJ2 420 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 FAM228AQ86W67 206 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 SYCP3Q8IZU3 236 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 ZSWIM2Q8NEG5 633 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 TMEM40Q8WWA1 233 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 ZBTB10Q96DT7 871 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 FAXDC2Q96IV6 333 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 DDX47Q9H0S4 455 aaKnown RBP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.23□□□□□ -1.09
CDKL5-202ENST00000379996 RSPH14Q9UHP6 348 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 FAM169AQ9Y6X4 670 aa8.23□□□□□ -1.09
CDKL5-202ENST00000379996 DCDC2CA8MYV0 355 aa8.22□□□□□ -1.09
CDKL5-202ENST00000379996 HNRNPDLO14979 420 aaKnown RBP8.22□□□□□ -1.09
CDKL5-202ENST00000379996 OGTO15294 1046 aa8.22□□□□□ -1.09
CDKL5-202ENST00000379996 NUDT17P0C025 328 aa8.22□□□□□ -1.09
CDKL5-202ENST00000379996 H2AFZP0C0S5 128 aa8.22□□□□□ -1.09
CDKL5-202ENST00000379996 ARF4P18085 180 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-202ENST00000379996 STAT1P42224 750 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms