RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 CEP78Q5JTW2 689 aa8.92□□□□□ -0.98
NHLRC3-201ENST00000379599 EFHC1Q5JVL4 640 aa8.92□□□□□ -0.98
NHLRC3-201ENST00000379599 H2AFVQ71UI9 128 aa8.92□□□□□ -0.98
NHLRC3-201ENST00000379599 EGLN2Q96KS0 407 aa8.92□□□□□ -0.98
NHLRC3-201ENST00000379599 TCF12Q99081 682 aa8.92□□□□□ -0.98
NHLRC3-201ENST00000379599 METTL22Q9BUU2 404 aaPredicted RBP8.92□□□□□ -0.98
NHLRC3-201ENST00000379599 KANSL3Q9P2N6 904 aa8.92□□□□□ -0.98
NHLRC3-201ENST00000379599 EBF1Q9UH73 591 aa8.92□□□□□ -0.98
NHLRC3-201ENST00000379599 ASIC3Q9UHC3 531 aa8.92□□□□□ -0.98
NHLRC3-201ENST00000379599 ADGRA3Q8IWK6 1321 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 H7C0C1 242 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 PSMD12O00232 456 aaPredicted RBP8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 TAF4O00268 1085 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 GIPC1O14908 333 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 KLRC4O43908 158 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 DNAJA2O60884 412 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 CRTAMO95727 393 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 TTC4O95801 387 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 POLR2MP0CAP2 368 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 RPA1P27694 616 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 HIC1Q14526 733 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 TRIP13Q15645 432 aaPredicted RBP8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 SLC1A5Q15758 541 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 CYP4F22Q6NT55 531 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 LVRNQ6Q4G3 990 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 RNF111Q6ZNA4 994 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 AHI1Q8N157 1196 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 CLIP4Q8N3C7 705 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 SRBD1Q8N5C6 995 aaKnown RBP8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 SHKBP1Q8TBC3 707 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 ACMSDQ8TDX5 336 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 DCUN1D1Q96GG9 259 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 ZNF496Q96IT1 587 aaPredicted RBP8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 TMEM87BQ96K49 555 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 RTFDC1Q9BY42 306 aaPredicted RBP8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 SEZ6LQ9BYH1 1024 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 PLEKHA5Q9HAU0 1116 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 LY9Q9HBG7 655 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 IGSF9Q9P2J2 1179 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 PPARGC1AQ9UBK2 798 aaKnown RBP8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 TMX2-CTNND1H3BSU7 103 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 CASQ2O14958 399 aaPredicted RBP8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 PEX1O43933 1283 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 BBOX1O75936 387 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 GYS1P13807 737 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 MUTP22033 750 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 SLC1A1P43005 524 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 ALDH1A3P47895 512 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 ATP2C1P98194 919 aaPredicted RBP8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 CDK16Q00536 496 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 NR1H3Q13133 447 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 C6orf52Q5T4I8 152 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 LSMEM1Q8N8F7 131 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 MRPL9Q9BYD2 267 aaKnown RBP8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 TP63Q9H3D4 680 aaPredicted RBP8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 CAAP1Q9H8G2 361 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 LRRC4BQ9NT99 713 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 THAP1Q9NVV9 213 aa8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 AGO2Q9UKV8 859 aaKnown RBP8.91□□□□□ -0.98
NHLRC3-201ENST00000379599 MEI4A8MW99 385 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 KPNA4O00629 521 aaPredicted RBP8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 TSPAN1O60635 241 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 PRKACAP17612 351 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 ABCB4P21439 1286 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 CHRNA3P32297 505 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 PTGIRP43119 386 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 SCNN1DP51172 638 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 THOP1P52888 689 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 PEX3P56589 373 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 NLRP6P59044 892 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 CLUL1Q15846 466 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 GRIK5Q16478 980 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 CARTPTQ16568 116 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 COBLL1Q53SF7 1204 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 PERM1Q5SV97 790 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 RWDD4Q6NW29 188 aaKnown RBP8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 HEATR4Q86WZ0 1026 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 CADM3Q8N126 398 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 TOR1AIP2Q8NFQ8 470 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 IGDCC4Q8TDY8 1250 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 MAML1Q92585 1016 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 ART4Q93070 314 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 C9orf72Q96LT7 481 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 PWWP2AQ96N64 755 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 POP1Q99575 1024 aaKnown RBP8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 EDEM3Q9BZQ6 932 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 NMUR2Q9GZQ4 415 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 CDH19Q9H159 772 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 ZNF696Q9H7X3 374 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 DISC1Q9NRI5 854 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 MYH11P35749 1972 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 C1orf232A0A0U1RR37 186 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 SYCE1LA8MT33 242 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 FOXP2O15409 715 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 CAPN1P07384 714 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 FOSL1P15407 271 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 PDE6AP16499 860 aa8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 LONP1P36776 959 aaKnown RBP8.9□□□□□ -0.98
NHLRC3-201ENST00000379599 NR4A2P43354 598 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms