RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 ZNF560Q96MR9 790 aa20.38■□□□□ 0.85
TMEM88B-201ENST00000378821 MKNK1Q9BUB5 465 aa20.38■□□□□ 0.85
TMEM88B-201ENST00000378821 TRMT61BQ9BVS5 477 aaKnown RBP20.38■□□□□ 0.85
TMEM88B-201ENST00000378821 SEMA4AQ9H3S1 761 aa20.38■□□□□ 0.85
TMEM88B-201ENST00000378821 LTB4R2Q9NPC1 389 aa20.38■□□□□ 0.85
TMEM88B-201ENST00000378821 RBAKQ9NYW8 714 aaPredicted RBP20.38■□□□□ 0.85
TMEM88B-201ENST00000378821 GOLGA6L4A6NEF3 574 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 EIF3DO15371 548 aaKnown RBP eCLIP20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 LRRN2O75325 713 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 GJA1P17302 382 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 WEE1P30291 646 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 MLLT6P55198 1093 aaPredicted RBP20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 SLC39A12Q504Y0 691 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 STXBP4Q6ZWJ1 553 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 GAREM2Q75VX8 874 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 MFSD6LQ8IWD5 586 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 FMR1NBQ8N0W7 255 aaPredicted RBP20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 LRRC52Q8N7C0 313 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 ZNF507Q8TCN5 953 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 IRF7Q92985 503 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 NKD2Q969F2 451 aaPredicted RBP20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 GDAP2Q9NXN4 497 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 ITGA11Q9UKX5 1188 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 CFAP54Q96N23 3096 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 NUP210Q8TEM1 1887 aaPredicted RBP20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 CACNA1IQ9P0X4 2223 aa20.37■□□□□ 0.85
TMEM88B-201ENST00000378821 NCANO14594 1321 aa20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 A0A1W2PRU2 124 aa20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 FAM170BA6NMN3 283 aa20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 ARNTLO00327 626 aa20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 MYL1P05976 194 aa20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 RPS9P46781 194 aaKnown RBP20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 TFAMQ00059 246 aaKnown RBP20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 KMT5BQ4FZB7 885 aa20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 SCARA3Q6AZY7 606 aa20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 ZNF852Q6ZMS4 543 aa20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 ITIH5Q86UX2 942 aa20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 GPD1LQ8N335 351 aa20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 SPATA18Q8TC71 538 aa20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 SPPL2BQ8TCT7 592 aa20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 ZNF334Q9HCZ1 680 aaPredicted RBP20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 SLC39A2Q9NP94 309 aa20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 HEBP1Q9NRV9 189 aa20.36■□□□□ 0.85
TMEM88B-201ENST00000378821 DMDP11532 3685 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 DENND4CQ5VZ89 1909 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 UBE4BO95155 1302 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 ITGB3P05106 788 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 SP9P0CG40 484 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 HAPLN1P10915 354 aaPredicted RBP20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 ATF6P18850 670 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 POLR2BP30876 1174 aaKnown RBP20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 VIPR2P41587 438 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 FCHO2Q0JRZ9 810 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 GRM2Q14416 872 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 TPRG1Q6ZUI0 275 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 LIMS2Q7Z4I7 341 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 PDCL2Q8N4E4 241 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 ENGASEQ8NFI3 743 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 SCFD1Q8WVM8 642 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 RSPRY1Q96DX4 576 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 BCO2Q9BYV7 579 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 PCIF1Q9H4Z3 704 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 BRD9Q9H8M2 597 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 IL21Q9HBE4 155 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 PDE11AQ9HCR9 933 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 EXOC1Q9NV70 894 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 SIX4Q9UIU6 781 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 AGAP1Q9UPQ3 857 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 TICRRQ7Z2Z1 1910 aa20.35■□□□□ 0.85
TMEM88B-201ENST00000378821 GOLGA8IPA6NC78 632 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 GOLGA8JA6NMD2 632 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 HEPACAM2A8MVW5 462 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 SOAT2O75908 522 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 CD72P21854 359 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 TARSP26639 723 aaKnown RBP20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 DPYDQ12882 1025 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 UBXN2BQ14CS0 331 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 ZNF528Q3MIS6 628 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 MAMSTRQ6ZN01 415 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 DCP1BQ8IZD4 617 aaKnown RBP20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 TMEM86AQ8N2M4 240 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 KIAA0895Q8NCT3 520 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 PKMYT1Q99640 499 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 ACBD6Q9BR61 282 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 KIAA1586Q9HCI6 787 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 INTS13Q9NVM9 706 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 OBP2AQ9NY56 170 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 FBXO4Q9UKT5 387 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 L1RE1Q9UN81 338 aa20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 MRPS17Q9Y2R5 130 aaKnown RBP20.34■□□□□ 0.85
TMEM88B-201ENST00000378821 ZNF233A6NK53 670 aa20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 MAN2B1O00754 1011 aa20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 GABRDO14764 452 aa20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 NCAM2O15394 837 aa20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 TGFB1I1O43294 461 aa20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 GADD45BO75293 160 aaPredicted RBP20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 RPN1P04843 607 aaKnown RBP20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 GDI1P31150 447 aa20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 SNRPFP62306 86 aaKnown RBP20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 RBP5P82980 135 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms