RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 GTPBP10A4D1E9 387 aaKnown RBP20.04■□□□□ 0.8
SSU72-203ENST00000378725 VNN2O95498 520 aa20.04■□□□□ 0.8
SSU72-203ENST00000378725 PRKCSHP14314 528 aaPredicted RBP20.04■□□□□ 0.8
SSU72-203ENST00000378725 CPB1P15086 417 aa20.04■□□□□ 0.8
SSU72-203ENST00000378725 KCNA5P22460 613 aa20.04■□□□□ 0.8
SSU72-203ENST00000378725 SMARCB1Q12824 385 aa20.04■□□□□ 0.8
SSU72-203ENST00000378725 LEXMQ3ZCV2 418 aa20.04■□□□□ 0.8
SSU72-203ENST00000378725 INTS6LQ5JSJ4 861 aaKnown RBP20.04■□□□□ 0.8
SSU72-203ENST00000378725 FAM171BQ6P995 826 aa20.04■□□□□ 0.8
SSU72-203ENST00000378725 ELMSAN1Q6PJG2 1045 aa20.04■□□□□ 0.8
SSU72-203ENST00000378725 EP400NLQ6ZTU2 488 aa20.04■□□□□ 0.8
SSU72-203ENST00000378725 TCEAL8Q8IYN2 117 aa20.04■□□□□ 0.8
SSU72-203ENST00000378725 DCP1BQ8IZD4 617 aaKnown RBP20.04■□□□□ 0.8
SSU72-203ENST00000378725 OR6B3Q8NGW1 331 aa20.04■□□□□ 0.8
SSU72-203ENST00000378725 CDH9Q9ULB4 789 aa20.04■□□□□ 0.8
SSU72-203ENST00000378725 TSC2P49815 1807 aa20.04■□□□□ 0.8
SSU72-203ENST00000378725 HCRTO43612 131 aa20.03■□□□□ 0.8
SSU72-203ENST00000378725 WEE2P0C1S8 567 aa20.03■□□□□ 0.8
SSU72-203ENST00000378725 ACAT1P24752 427 aaKnown RBP20.03■□□□□ 0.8
SSU72-203ENST00000378725 RAP1GAPP47736 663 aa20.03■□□□□ 0.8
SSU72-203ENST00000378725 TSPY1Q01534 308 aa20.03■□□□□ 0.8
SSU72-203ENST00000378725 KRT31Q15323 416 aa20.03■□□□□ 0.8
SSU72-203ENST00000378725 CMASQ8NFW8 434 aaPredicted RBP20.03■□□□□ 0.8
SSU72-203ENST00000378725 FAM124BQ9H5Z6 455 aaPredicted RBP20.03■□□□□ 0.8
SSU72-203ENST00000378725 CBX8Q9HC52 389 aa20.03■□□□□ 0.8
SSU72-203ENST00000378725 HSFX1Q9UBD0 423 aa20.03■□□□□ 0.8
SSU72-203ENST00000378725 LIMA1Q9UHB6 759 aaKnown RBP20.03■□□□□ 0.8
SSU72-203ENST00000378725 MTMR11A4FU01 709 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 H3BQ06 376 aaPredicted RBP20.02■□□□□ 0.8
SSU72-203ENST00000378725 ZMYND10O75800 440 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 CLSTN1O94985 981 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 SEC24AO95486 1093 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 PDGFRBP09619 1106 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 ADCY1Q08828 1119 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 INCA1Q0VD86 236 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 SLC39A12Q504Y0 691 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 SCARA5Q6ZMJ2 495 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 CCDC149Q6ZUS6 474 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 UNC93AQ86WB7 457 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 C2orf15Q8WU43 125 aaKnown RBP20.02■□□□□ 0.8
SSU72-203ENST00000378725 RHOBTB2Q9BYZ6 727 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 SFXN1Q9H9B4 322 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 TMLHEQ9NVH6 421 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 ZDHHC7Q9NXF8 308 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 CD207Q9UJ71 328 aa20.02■□□□□ 0.8
SSU72-203ENST00000378725 MYBPHLA2RUH7 354 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 A8MXQ7 604 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 ATP2C2O75185 946 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 HOXA9P31269 272 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 ELF1P32519 619 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 ITIH3Q06033 890 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 CUL2Q13617 745 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 NFE2Q16621 373 aaPredicted RBP20.01■□□□□ 0.79
SSU72-203ENST00000378725 LRSAM1Q6UWE0 723 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 CYP26C1Q6V0L0 522 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 GBP6Q6ZN66 633 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 CRYBG2Q8N1P7 616 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 C12orf76Q8N812 135 aaPredicted RBP20.01■□□□□ 0.79
SSU72-203ENST00000378725 ATAD1Q8NBU5 361 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 SMRP1Q8NCR6 262 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.01■□□□□ 0.79
SSU72-203ENST00000378725 NT5C1BQ96P26 610 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 PGLYRP2Q96PD5 576 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 SYT15Q9BQS2 421 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 INTS2Q9H0H0 1204 aaKnown RBP20.01■□□□□ 0.79
SSU72-203ENST00000378725 ADAM7Q9H2U9 754 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 CYP4F11Q9HBI6 524 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 CRTAC1Q9NQ79 661 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 TAB2Q9NYJ8 693 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 THEGQ9P2T0 379 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 GTF3C4Q9UKN8 822 aa20.01■□□□□ 0.79
SSU72-203ENST00000378725 CCDC195A0A1B0GUA6 201 aa20■□□□□ 0.79
SSU72-203ENST00000378725 BECN2A8MW95 431 aa20■□□□□ 0.79
SSU72-203ENST00000378725 C8AP07357 584 aa20■□□□□ 0.79
SSU72-203ENST00000378725 POU2F2P09086 479 aa20■□□□□ 0.79
SSU72-203ENST00000378725 HNRNPA1P09651 372 aaKnown RBP eCLIP20■□□□□ 0.79
SSU72-203ENST00000378725 PTPN1P18031 435 aaKnown RBP20■□□□□ 0.79
SSU72-203ENST00000378725 CDK11BP21127 795 aaKnown RBP20■□□□□ 0.79
SSU72-203ENST00000378725 TBXAS1P24557 533 aaPredicted RBP20■□□□□ 0.79
SSU72-203ENST00000378725 NDST1P52848 882 aa20■□□□□ 0.79
SSU72-203ENST00000378725 ZNF445P59923 1031 aa20■□□□□ 0.79
SSU72-203ENST00000378725 TFF2Q03403 129 aa20■□□□□ 0.79
SSU72-203ENST00000378725 LRMPQ12912 555 aa20■□□□□ 0.79
SSU72-203ENST00000378725 DUSP4Q13115 394 aa20■□□□□ 0.79
SSU72-203ENST00000378725 EXOC3L4Q17RC7 722 aa20■□□□□ 0.79
SSU72-203ENST00000378725 LIN9Q5TKA1 542 aa20■□□□□ 0.79
SSU72-203ENST00000378725 APTXQ7Z2E3 356 aaKnown RBP20■□□□□ 0.79
SSU72-203ENST00000378725 TTC39CQ8N584 583 aa20■□□□□ 0.79
SSU72-203ENST00000378725 ANKRD20A12PQ8NF67 263 aa20■□□□□ 0.79
SSU72-203ENST00000378725 SLC7A14Q8TBB6 771 aa20■□□□□ 0.79
SSU72-203ENST00000378725 MYCBPAPQ8TBZ2 947 aa20■□□□□ 0.79
SSU72-203ENST00000378725 SPPL2BQ8TCT7 592 aa20■□□□□ 0.79
SSU72-203ENST00000378725 WHAMMQ8TF30 809 aa20■□□□□ 0.79
SSU72-203ENST00000378725 ATXN2LQ8WWM7 1075 aaKnown RBP20■□□□□ 0.79
SSU72-203ENST00000378725 CRACR2AQ9BSW2 395 aa20■□□□□ 0.79
SSU72-203ENST00000378725 VPS16Q9H269 839 aa20■□□□□ 0.79
SSU72-203ENST00000378725 CRISPLD1Q9H336 500 aa20■□□□□ 0.79
SSU72-203ENST00000378725 GCNT4Q9P109 453 aa20■□□□□ 0.79
SSU72-203ENST00000378725 PLXNA3P51805 1871 aa20■□□□□ 0.79
SSU72-203ENST00000378725 CILPO75339 1184 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms