RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 NIF3L1Q9GZT8 377 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 CISHQ9NSE2 258 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 SHOC2Q9UQ13 582 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.18■□□□□ 0.66
TDP2-202ENST00000378198 WDR90Q96KV7 1748 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 MAGEB2O15479 319 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 FAM189A1O60320 539 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 MAFO75444 373 aaPredicted RBP19.18■□□□□ 0.66
TDP2-202ENST00000378198 ETS1P14921 441 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 NF2P35240 595 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 CDKN2BP42772 138 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 MYL6P60660 151 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 ADCY1Q08828 1119 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 RNASEH2BQ5TBB1 312 aaKnown RBP19.18■□□□□ 0.66
TDP2-202ENST00000378198 SCARA3Q6AZY7 606 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 CGB2Q6NT52 195 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 GPAT2Q6NUI2 795 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 CENPUQ71F23 418 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 PCGF5Q86SE9 256 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 PCYT2Q99447 389 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 PCDH9Q9HC56 1237 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 CEP83Q9Y592 693 aa19.18■□□□□ 0.66
TDP2-202ENST00000378198 ASMTLO95671 621 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 FOXN2P32314 431 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 WDR4P57081 412 aaKnown RBP19.17■□□□□ 0.66
TDP2-202ENST00000378198 CCDC15Q0P6D6 951 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 NEDD9Q14511 834 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 RASA2Q15283 850 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 DUOXA2Q1HG44 320 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 POLNQ7Z5Q5 900 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 ZBTB33Q86T24 672 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 PNMA8AQ86V59 439 aaPredicted RBP19.17■□□□□ 0.66
TDP2-202ENST00000378198 FITM2Q8N6M3 262 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 TCHPQ9BT92 498 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 MTMR12Q9C0I1 747 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 STRIP2Q9ULQ0 834 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 SMG5Q9UPR3 1016 aaKnown RBP19.17■□□□□ 0.66
TDP2-202ENST00000378198 EFR3BQ9Y2G0 817 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 PPME1Q9Y570 386 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 SSC5DA1L4H1 1573 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 ANK1P16157 1881 aa19.17■□□□□ 0.66
TDP2-202ENST00000378198 A0A1B0GUA9 196 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 LRRD1A4D1F6 860 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 POC1B-GALNT4F8VUJ3 575 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 OGTO15294 1046 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 MSCO60682 206 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 FARP2O94887 1054 aaPredicted RBP19.16■□□□□ 0.66
TDP2-202ENST00000378198 ALDH5A1P51649 535 aaPredicted RBP19.16■□□□□ 0.66
TDP2-202ENST00000378198 STAT5BP51692 787 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 TRPC3Q13507 836 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 WDR72Q3MJ13 1102 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 WDTC1Q8N5D0 677 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 DENND1AQ8TEH3 1009 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 KLHL29Q96CT2 875 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 TRABDQ9H4I3 376 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 VPS37BQ9H9H4 285 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 SLC24A2Q9UI40 661 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 SGK1O00141 431 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 UBA1P22314 1058 aaKnown RBP19.16■□□□□ 0.66
TDP2-202ENST00000378198 CNTN2Q02246 1040 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 FSTL1Q12841 308 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 SPARCL1Q14515 664 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 ZNF394Q53GI3 561 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 DALRD3Q5D0E6 543 aaKnown RBP19.16■□□□□ 0.66
TDP2-202ENST00000378198 IER5Q5VY09 327 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 TXNRD3NBQ6F5E7 133 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 SLC35B2Q8TB61 432 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 PRPF31Q8WWY3 499 aaKnown RBP19.16■□□□□ 0.66
TDP2-202ENST00000378198 SMC6Q96SB8 1091 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 FRMD8P1Q9BZ68 369 aaPredicted RBP19.16■□□□□ 0.66
TDP2-202ENST00000378198 STARD13Q9Y3M8 1113 aa19.16■□□□□ 0.66
TDP2-202ENST00000378198 MGAMO43451 1857 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 TTLL13PA6NNM8 815 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 IGF2BP3O00425 579 aaKnown RBP eCLIP19.15■□□□□ 0.66
TDP2-202ENST00000378198 KRT15P19012 456 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 SKIV2L2P42285 1042 aaKnown RBP19.15■□□□□ 0.66
TDP2-202ENST00000378198 YWHAEP62258 255 aaKnown RBP19.15■□□□□ 0.66
TDP2-202ENST00000378198 KCNJ2P63252 427 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 PLCB3Q01970 1234 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 FASTKD3Q14CZ7 662 aaKnown RBP19.15■□□□□ 0.66
TDP2-202ENST00000378198 PKN2Q16513 984 aaKnown RBP19.15■□□□□ 0.66
TDP2-202ENST00000378198 RGS9BPQ6ZS82 235 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 ZBED8Q8IZ13 594 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 PRCCQ92733 491 aaPredicted RBP19.15■□□□□ 0.66
TDP2-202ENST00000378198 MYCBPQ99417 103 aaPredicted RBP19.15■□□□□ 0.66
TDP2-202ENST00000378198 ACO2Q99798 780 aaKnown RBP19.15■□□□□ 0.66
TDP2-202ENST00000378198 PAIP2Q9BPZ3 127 aaKnown RBP19.15■□□□□ 0.66
TDP2-202ENST00000378198 PHACTR1Q9C0D0 580 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 ARHGEF3Q9NR81 526 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 MCM8Q9UJA3 840 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 BRCA1P38398 1863 aaKnown RBP19.15■□□□□ 0.66
TDP2-202ENST00000378198 SPAG7O75391 227 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 POLR2BP30876 1174 aaKnown RBP19.15■□□□□ 0.66
TDP2-202ENST00000378198 TTC13Q8NBP0 860 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 SLC16A10Q8TF71 515 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 RMDN2Q96LZ7 410 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 TMEM121Q9BTD3 319 aa19.15■□□□□ 0.66
TDP2-202ENST00000378198 CPSF3Q9UKF6 684 aaKnown RBP19.15■□□□□ 0.66
TDP2-202ENST00000378198 ALADP13716 330 aa19.14■□□□□ 0.65
TDP2-202ENST00000378198 MGAT5Q09328 741 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms