RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 FAM153BP0C7A2 387 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 ACADSBP45954 432 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 RAD23BP54727 409 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 RHBDL3P58872 404 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 FAM153CQ494X1 144 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 TMEM139Q8IV31 216 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 FBXO16Q8IX29 292 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-201ENST00000378156 FEZF2Q8TBJ5 459 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 FAM153AQ9UHL3 310 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 TRAF3IP3Q9Y228 551 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 PIK3C2AO00443 1686 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 DFFAO00273 331 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 MAP2K7O14733 419 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 TYK2P29597 1187 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 MIIPQ5JXC2 388 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 GANCQ8TET4 914 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 SLC35C1Q96A29 364 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 GLT1D1Q96MS3 346 aa15.73■□□□□ 0.11
NPHP4-201ENST00000378156 BRD2P25440 801 aaKnown RBP15.72■□□□□ 0.11
NPHP4-201ENST00000378156 SLC26A2P50443 739 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 SESN2P58004 480 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-201ENST00000378156 ZNF235Q14590 738 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 ACAD10Q6JQN1 1059 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 DNERQ8NFT8 737 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 TTC8Q8TAM2 541 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 UBA3Q8TBC4 463 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 CAVIN3Q969G5 261 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 FAM167BQ9BTA0 163 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 RAB6BQ9NRW1 208 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 GNL1P36915 607 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-201ENST00000378156 TMBIM4Q9HC24 238 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 GBA2Q9HCG7 927 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-201ENST00000378156 UBQLN1Q9UMX0 589 aaKnown RBP15.72■□□□□ 0.11
NPHP4-201ENST00000378156 KNDC1Q76NI1 1749 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 VWA5AO00534 786 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 ATP9BO43861 1147 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 RGS2P41220 211 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 MAGEA4P43358 317 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 MRIQ9BWK5 157 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 ZBTB39O15060 712 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 PNPLA4P41247 253 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 POU5F1BQ06416 359 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 PGM5Q15124 567 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 METTL7BQ6UX53 244 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 EPS8L3Q8TE67 593 aaKnown RBP15.72■□□□□ 0.11
NPHP4-201ENST00000378156 RAPGEF5Q92565 580 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 ABCF3Q9NUQ8 709 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 ZFATQ9P243 1243 aa15.72■□□□□ 0.11
NPHP4-201ENST00000378156 EIF4E1BA6NMX2 242 aaKnown RBP15.71■□□□□ 0.11
NPHP4-201ENST00000378156 TGFB3P10600 412 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 CYP11B1P15538 503 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 TAF6P49848 677 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 SMTNL2Q2TAL5 461 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 DCAF4L1Q3SXM0 396 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 CCNYL1Q8N7R7 359 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 ATP8B4Q8TF62 1192 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 ACSF2Q96CM8 615 aaPredicted RBP15.71■□□□□ 0.11
NPHP4-201ENST00000378156 TRIM33Q9UPN9 1127 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 TRPM8Q7Z2W7 1104 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 TNFRSF25Q93038 417 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 ROPN1BQ9BZX4 212 aaPredicted RBP15.71■□□□□ 0.11
NPHP4-201ENST00000378156 RSAD1Q9HA92 442 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 ROPN1Q9HAT0 212 aaPredicted RBP15.71■□□□□ 0.11
NPHP4-201ENST00000378156 PRDM5Q9NQX1 630 aaPredicted RBP15.71■□□□□ 0.11
NPHP4-201ENST00000378156 SENP1Q9P0U3 644 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.71■□□□□ 0.11
NPHP4-201ENST00000378156 CAMTA1Q9Y6Y1 1673 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 EML1O00423 815 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 CXCL11O14625 94 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 CST8O60676 142 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 CAND2O75155 1236 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 KCNA1Q09470 495 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 MYBPC2Q14324 1141 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 TAS1R2Q8TE23 839 aa15.71■□□□□ 0.11
NPHP4-201ENST00000378156 GPBP1L1Q9HC44 474 aaPredicted RBP15.71■□□□□ 0.11
NPHP4-201ENST00000378156 VIL1P09327 827 aaKnown RBP15.7■□□□□ 0.1
NPHP4-201ENST00000378156 SLURP2P0DP57 97 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 YWHAHQ04917 246 aaPredicted RBP15.7■□□□□ 0.1
NPHP4-201ENST00000378156 RAD51Q06609 339 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 MPZL3Q6UWV2 235 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 NUDCD3Q8IVD9 361 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 TMC2Q8TDI7 906 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 ARHGEF26Q96DR7 871 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 AGAP3Q96P47 875 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 CXorf56Q9H5V9 222 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 PIDD1Q9HB75 910 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 C17orf102A2RUQ5 167 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 GTPBP10A4D1E9 387 aaKnown RBP15.7■□□□□ 0.1
NPHP4-201ENST00000378156 FAM47DPA6NHR8 397 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 DDX3XO00571 662 aaKnown RBP eCLIP15.7■□□□□ 0.14e-6■■■■■ 29.2
NPHP4-201ENST00000378156 SLITRK3O94933 977 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 RBP3P10745 1247 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 FNTAP49354 379 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 RARRES1P49788 294 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 ERVK-9P63128 1117 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 EFHC1Q5JVL4 640 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 ACAD11Q709F0 780 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 PTF1AQ7RTS3 328 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 SLC47A2Q86VL8 602 aa15.7■□□□□ 0.1
NPHP4-201ENST00000378156 C1orf131Q8NDD1 294 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms