RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 RAD23BP54727 409 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 CCNA1P78396 465 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 TUBB8Q3ZCM7 444 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 CCDC38Q502W7 563 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 ZNF365Q70YC5 407 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 NLRP14Q86W24 1093 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 EMC1Q8N766 993 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 JOSD2Q8TAC2 188 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 GRK7Q8WTQ7 553 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 SLITRK1Q96PX8 696 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 SELENOSQ9BQE4 189 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 C16orf70Q9BSU1 422 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 ZWILCHQ9H900 591 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 WHRNQ9P202 907 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 ANAPC5Q9UJX4 755 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 H3BRB1 525 aa20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 RGS16O15492 202 aaPredicted RBP20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 IL18RAPO95256 599 aa20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 SNAI1O95863 264 aaPredicted RBP20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 EIF4BP23588 611 aaKnown RBP20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 POLR2BP30876 1174 aaKnown RBP20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 LONRF1Q17RB8 773 aa20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 KCNT1Q5JUK3 1230 aa20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 DPP9Q86TI2 863 aa20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 GLIS1Q8NBF1 620 aa20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 TLCD1Q96CP7 247 aa20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 CCT8L2Q96SF2 557 aa20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 CXCL16Q9H2A7 254 aa20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 TUT1Q9H6E5 874 aaKnown RBP20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 RNF19AQ9NV58 838 aa20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 DNPEPQ9ULA0 475 aa20.34■□□□□ 0.85
PCDHA4-201ENST00000378125 LRRD1A4D1F6 860 aa20.33■□□□□ 0.85
PCDHA4-201ENST00000378125 ZSCAN5DPP0CG00 497 aa20.33■□□□□ 0.85
PCDHA4-201ENST00000378125 ETS1P14921 441 aa20.33■□□□□ 0.85
PCDHA4-201ENST00000378125 ITIH2P19823 946 aa20.33■□□□□ 0.85
PCDHA4-201ENST00000378125 CCNG2Q16589 344 aa20.33■□□□□ 0.85
PCDHA4-201ENST00000378125 SLC10A6Q3KNW5 377 aa20.33■□□□□ 0.85
PCDHA4-201ENST00000378125 MTHFD1LQ6UB35 978 aa20.33■□□□□ 0.85
PCDHA4-201ENST00000378125 PPTC7Q8NI37 304 aa20.33■□□□□ 0.85
PCDHA4-201ENST00000378125 ZNF473Q8WTR7 871 aaKnown RBP20.33■□□□□ 0.85
PCDHA4-201ENST00000378125 CPXM1Q96SM3 734 aa20.33■□□□□ 0.85
PCDHA4-201ENST00000378125 SYNCQ9H7C4 482 aa20.33■□□□□ 0.85
PCDHA4-201ENST00000378125 PCDHGC3Q9UN70 934 aa20.33■□□□□ 0.85
PCDHA4-201ENST00000378125 MAN1A1P33908 653 aa20.33■□□□□ 0.84
PCDHA4-201ENST00000378125 PSMC1P62191 440 aaKnown RBP20.33■□□□□ 0.84
PCDHA4-201ENST00000378125 KYNUQ16719 465 aa20.33■□□□□ 0.84
PCDHA4-201ENST00000378125 PPP1R15BQ5SWA1 713 aa20.33■□□□□ 0.84
PCDHA4-201ENST00000378125 PPP1R2P3Q6NXS1 205 aa20.33■□□□□ 0.84
PCDHA4-201ENST00000378125 KIAA0319LQ8IZA0 1049 aa20.33■□□□□ 0.84
PCDHA4-201ENST00000378125 SLC4A11Q8NBS3 891 aa20.33■□□□□ 0.84
PCDHA4-201ENST00000378125 MYCBPAPQ8TBZ2 947 aa20.33■□□□□ 0.84
PCDHA4-201ENST00000378125 MS4A4AQ96JQ5 239 aa20.33■□□□□ 0.84
PCDHA4-201ENST00000378125 ELOVL4Q9GZR5 314 aa20.33■□□□□ 0.84
PCDHA4-201ENST00000378125 AGAP1Q9UPQ3 857 aa20.33■□□□□ 0.84
PCDHA4-201ENST00000378125 FOXO6A8MYZ6 492 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 PSMA2P25787 234 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 DYNLT1P63172 113 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 RHBDF2Q6PJF5 856 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 RCOR2Q8IZ40 523 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 BRI3BPQ8WY22 251 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 ZNF518BQ9C0D4 1074 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 SAE1Q9UBE0 346 aaPredicted RBP20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 PLXNA1Q9UIW2 1896 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 KRT3P12035 628 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 SMPD1P17405 629 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 SPOCD1Q6ZMY3 1216 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 ILDR2Q71H61 639 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 C3orf20Q8ND61 904 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 UBA3Q8TBC4 463 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 BCO2Q9BYV7 579 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 C10orf88Q9H8K7 445 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 VTA1Q9NP79 307 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 METTL5Q9NRN9 209 aaKnown RBP20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 ZNF148Q9UQR1 794 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 NEU2Q9Y3R4 380 aa20.32■□□□□ 0.84
PCDHA4-201ENST00000378125 RASGRF2O14827 1237 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 MCF2P10911 925 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 YWHAEP62258 255 aaKnown RBP20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 BYSLQ13895 437 aaKnown RBP20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 KIZQ2M2Z5 673 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 IZUMO3Q5VZ72 239 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 LINC01465Q8N7H1 131 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 HPDLQ96IR7 371 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 RBM41Q96IZ5 413 aaKnown RBP20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 KATNBL1Q9H079 304 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 FEZ2Q9UHY8 353 aaPredicted RBP20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 FAM169AQ9Y6X4 670 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 GLTPD2A6NH11 291 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 MAGEB2O15479 319 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 ERBB2P04626 1255 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 CDH5P33151 784 aaPredicted RBP20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 CETN2P41208 172 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 SF3A3Q12874 501 aaKnown RBP eCLIP20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 GRIK4Q16099 956 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 P3H1Q32P28 736 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 CXorf38Q8TB03 319 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 HEXIM2Q96MH2 286 aaKnown RBP20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 NFKBIZQ9BYH8 718 aa20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 FAM49AQ9H0Q0 323 aaPredicted RBP20.31■□□□□ 0.84
PCDHA4-201ENST00000378125 SETD4Q9NVD3 440 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms