RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 GIPC2Q8TF65 315 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 PI4K2AQ9BTU6 479 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 RPP25Q9BUL9 199 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 AVENQ9NQS1 362 aaPredicted RBP12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 GDE1Q9NZC3 331 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 FRMD4BQ9Y2L6 1034 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 PCDHB5Q9Y5E4 795 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 A0A1W2PRU2 124 aa12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 HCRTO43612 131 aa12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 LHX1P48742 406 aa12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 TEAD2Q15562 447 aa12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 INTS6LQ5JSJ4 861 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 OSTM1Q86WC4 334 aa12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 C2orf15Q8WU43 125 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 GCNAQ96QF7 691 aa12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 ACBD6Q9BR61 282 aa12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 DNAJC25Q9H1X3 360 aa12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 KCTD10Q9H3F6 313 aa12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 ATXN3LQ9H3M9 355 aa12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 TMLHEQ9NVH6 421 aa12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 GDAP2Q9NXN4 497 aa12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 NXF1Q9UBU9 619 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-203ENST00000377808 LRRIQ3A6PVS8 624 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 PDXKO00764 312 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 CST3P01034 146 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 GABRR2P28476 465 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 PCSK1P29120 753 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 AVPR2P30518 371 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 GPR15P49685 360 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 PSMC1P62191 440 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 GPC5P78333 572 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 SMARCB1Q12824 385 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 GRM2Q14416 872 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 KCNB1Q14721 858 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 NFE2Q16621 373 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 SOWAHAQ2M3V2 549 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 WDR72Q3MJ13 1102 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 IER5LQ5T953 404 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 DNAJB7Q7Z6W7 309 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 SPATA2LQ8IUW3 424 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 SMYD4Q8IYR2 804 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 FMR1NBQ8N0W7 255 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 SHKBP1Q8TBC3 707 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 PSMG2Q969U7 264 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 SNX25Q9H3E2 840 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 ZFP14Q9HCL3 533 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 RMND1Q9NWS8 449 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 HOOK1Q9UJC3 728 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 GTF3C4Q9UKN8 822 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 MAGED2Q9UNF1 606 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 ASB3Q9Y575 518 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 NOTCH4Q99466 2003 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 TRIOO75962 3097 aa12.4□□□□□ -0.42
SMARCE1-203ENST00000377808 NRG2O14511 850 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 MOSPD3O75425 235 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 ECI2O75521 394 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 SMC2O95347 1197 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 PDGFRBP09619 1106 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 HAPLN1P10915 354 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 ATF6P18850 670 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 NR2F2P24468 414 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 MYL6P60660 151 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 CYP27A1Q02318 531 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 FAM160A1Q05DH4 1040 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 SNW1Q13573 536 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 CCDC142Q17RM4 750 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 ZNF699Q32M78 642 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 ARHGAP15Q53QZ3 475 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 FAM78AQ5JUQ0 283 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 SDHAF4Q5VUM1 108 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 ASTLQ6HA08 431 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 TANGO2Q6ICL3 276 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 SCARA5Q6ZMJ2 495 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 TMC8Q8IU68 726 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 GPIHBP1Q8IV16 184 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 SLC9A9Q8IVB4 645 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 SCN4BQ8IWT1 228 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 STKLD1Q8NE28 680 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 OR6B3Q8NGW1 331 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 ZSCAN18Q8TBC5 510 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 PLEKHO2Q8TD55 490 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 ZNF516Q92618 1163 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 ERCC4Q92889 916 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 SYAP1Q96A49 352 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 ZSWIM3Q96MP5 696 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 SYT15Q9BQS2 421 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 MMRN2Q9H8L6 949 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 ZNF334Q9HCZ1 680 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 ARHGEF3Q9NR81 526 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 DMAC2Q9NW81 257 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 HSFX1Q9UBD0 423 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 WNT16Q9UBV4 365 aa12.39□□□□□ -0.43
SMARCE1-203ENST00000377808 MYBPHLA2RUH7 354 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 KRBA1A5PL33 1030 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 ATP2C2O75185 946 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 MICAL2O94851 1124 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 FGF19O95750 216 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 KRT13P13646 458 aa12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 WARSP23381 471 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-203ENST00000377808 CYP2F1P24903 491 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms