RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 ECI2O75521 394 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 FGF19O95750 216 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 RFX1P22670 979 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 PCSK1P29120 753 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 AVPR2P30518 371 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 CCR2P41597 374 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 NUBP1P53384 320 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 KCNB1Q14721 858 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 ASTLQ6HA08 431 aaPredicted RBP18.06■□□□□ 0.48
HMGN4-201ENST00000377575 DPH6Q7L8W6 267 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 SLC9A9Q8IVB4 645 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 ST13P5Q8NFI4 369 aaPredicted RBP18.06■□□□□ 0.48
HMGN4-201ENST00000377575 FAM200AQ8TCP9 573 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 PSMG2Q969U7 264 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 KXD1Q9BQD3 176 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 KCTD10Q9H3F6 313 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 PCDHB5Q9Y5E4 795 aa18.06■□□□□ 0.48
HMGN4-201ENST00000377575 NR3C1P04150 777 aa18.05■□□□□ 0.48
HMGN4-201ENST00000377575 CLCN5P51795 746 aa18.05■□□□□ 0.48
HMGN4-201ENST00000377575 AP3M2P53677 418 aa18.05■□□□□ 0.48
HMGN4-201ENST00000377575 INTS6LQ5JSJ4 861 aaKnown RBP18.05■□□□□ 0.48
HMGN4-201ENST00000377575 LRRTM3Q86VH5 581 aa18.05■□□□□ 0.48
HMGN4-201ENST00000377575 TMC8Q8IU68 726 aa18.05■□□□□ 0.48
HMGN4-201ENST00000377575 FLCNQ8NFG4 579 aa18.05■□□□□ 0.48
HMGN4-201ENST00000377575 GPR152Q8TDT2 470 aa18.05■□□□□ 0.48
HMGN4-201ENST00000377575 ELSPBP1Q96BH3 223 aa18.05■□□□□ 0.48
HMGN4-201ENST00000377575 RPP25Q9BUL9 199 aaKnown RBP18.05■□□□□ 0.48
HMGN4-201ENST00000377575 GPR88Q9GZN0 384 aa18.05■□□□□ 0.48
HMGN4-201ENST00000377575 ARHGEF3Q9NR81 526 aa18.05■□□□□ 0.48
HMGN4-201ENST00000377575 CA14Q9ULX7 337 aa18.05■□□□□ 0.48
HMGN4-201ENST00000377575 DENND4CQ5VZ89 1909 aa18.05■□□□□ 0.48
HMGN4-201ENST00000377575 PTPRDP23468 1912 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 MIA3Q5JRA6 1907 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 OBSL1O75147 1896 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 SOAT2O75908 522 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 PFKPQ01813 784 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 TRPC3Q13507 836 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 TAF12Q16514 161 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 SOWAHAQ2M3V2 549 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 CWF19L1Q69YN2 538 aaKnown RBP18.04■□□□□ 0.48
HMGN4-201ENST00000377575 SCARA3Q6AZY7 606 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 DNAJB7Q7Z6W7 309 aaPredicted RBP18.04■□□□□ 0.48
HMGN4-201ENST00000377575 SHKBP1Q8TBC3 707 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 ASB16Q96NS5 453 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 GCNAQ96QF7 691 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 SLITRK6Q9H5Y7 841 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 ZFP14Q9HCL3 533 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 ABCB6Q9NP58 842 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 DMAC2Q9NW81 257 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 FRMD4BQ9Y2L6 1034 aa18.04■□□□□ 0.48
HMGN4-201ENST00000377575 A0A1W2PRU2 124 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 GABRDO14764 452 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 PHACTR2O75167 634 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 MOSPD3O75425 235 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 HAPLN1P10915 354 aaPredicted RBP18.03■□□□□ 0.48
HMGN4-201ENST00000377575 ATF6P18850 670 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 ACAT1P24752 427 aaKnown RBP18.03■□□□□ 0.48
HMGN4-201ENST00000377575 PTPN5P54829 565 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 TNNC1P63316 161 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 TEAD2Q15562 447 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 FAM78AQ5JUQ0 283 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 IER5LQ5T953 404 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 OSTM1Q86WC4 334 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 FMR1NBQ8N0W7 255 aaPredicted RBP18.03■□□□□ 0.48
HMGN4-201ENST00000377575 GUF1Q8N442 669 aaKnown RBP18.03■□□□□ 0.48
HMGN4-201ENST00000377575 SMARCD2Q92925 531 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 SYAP1Q96A49 352 aaPredicted RBP18.03■□□□□ 0.48
HMGN4-201ENST00000377575 MMS19Q96T76 1030 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 LPIN3Q9BQK8 851 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 LRRC3Q9BY71 257 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 RMND1Q9NWS8 449 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 TRAF3IP3Q9Y228 551 aa18.03■□□□□ 0.48
HMGN4-201ENST00000377575 KRBA1A5PL33 1030 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 STK25O00506 426 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 CLSTN1O94985 981 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 STAU1O95793 577 aaKnown RBP18.02■□□□□ 0.48
HMGN4-201ENST00000377575 GJA1P17302 382 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 NPR3P17342 541 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 AOC1P19801 751 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 WARSP23381 471 aaKnown RBP18.02■□□□□ 0.48
HMGN4-201ENST00000377575 FCARP24071 287 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 CDC25CP30307 473 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 ATICP31939 592 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 CASP4P49662 377 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 GPC5P78333 572 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 FAM160A1Q05DH4 1040 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 BIRC3Q13489 604 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 NFIL3Q16649 462 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 ARHGAP15Q53QZ3 475 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 CEP135Q66GS9 1140 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 LIMS2Q7Z4I7 341 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 TMEM105Q8N8V8 129 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 PRSS33Q8NF86 280 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 ZSCAN18Q8TBC5 510 aaPredicted RBP18.02■□□□□ 0.48
HMGN4-201ENST00000377575 PARD3BQ8TEW8 1205 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 FUBP3Q96I24 572 aaKnown RBP eCLIP18.02■□□□□ 0.48
HMGN4-201ENST00000377575 SHDQ96IW2 340 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 SYT15Q9BQS2 421 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 PI4K2AQ9BTU6 479 aa18.02■□□□□ 0.48
HMGN4-201ENST00000377575 GZF1Q9H116 711 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms