RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 STAMBPL1Q96FJ0 436 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 FAM47DPA6NHR8 397 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 H7C0C1 242 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 MAFGO15525 162 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 ACO1P21399 889 aaKnown RBP13.63□□□□□ -0.23
USP11-204ENST00000377107 KCNA3P22001 575 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 TARSP26639 723 aaKnown RBP13.63□□□□□ -0.23
USP11-204ENST00000377107 ATP5OP48047 213 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 RGS7P49802 495 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 ZBTB16Q05516 673 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 TAF5Q15542 800 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 DENND1BQ6P3S1 775 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 CENPUQ71F23 418 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 BBOF1Q8ND07 529 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 JOSD2Q8TAC2 188 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 HEXIM2Q96MH2 286 aaKnown RBP13.63□□□□□ -0.23
USP11-204ENST00000377107 METTL5Q9NRN9 209 aaKnown RBP13.63□□□□□ -0.23
USP11-204ENST00000377107 CHMP2BQ9UQN3 213 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 ARL2BPQ9Y2Y0 163 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 PSTPIP1O43586 416 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 CYP1A1P04798 512 aaPredicted RBP13.62□□□□□ -0.23
USP11-204ENST00000377107 CD48P09326 243 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 CXCL8P10145 99 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 KRT4P19013 534 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 RPA3P35244 121 aaPredicted RBP13.62□□□□□ -0.23
USP11-204ENST00000377107 NAMPTP43490 491 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 CLNS1AP54105 237 aaKnown RBP13.62□□□□□ -0.23
USP11-204ENST00000377107 TFDP1Q14186 410 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 GJC2Q5T442 439 aaPredicted RBP13.62□□□□□ -0.23
USP11-204ENST00000377107 C3orf62Q6ZUJ4 267 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 PIGWQ7Z7B1 504 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 ZNF677Q86XU0 584 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 RCOR2Q8IZ40 523 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 C3orf20Q8ND61 904 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 OTUD5Q96G74 571 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 SLITRK1Q96PX8 696 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 LIASO43766 372 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 ZC3H11AO75152 810 aaKnown RBP eCLIP13.62□□□□□ -0.23
USP11-204ENST00000377107 FOXN2P32314 431 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 CTCFP49711 727 aaPredicted RBP13.62□□□□□ -0.23
USP11-204ENST00000377107 STAT4Q14765 748 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 HIF1AQ16665 826 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 SPDYCQ5MJ68 293 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 TREML2Q5T2D2 321 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 FITM2Q8N6M3 262 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 MRPL4Q9BYD3 311 aaKnown RBP13.62□□□□□ -0.23
USP11-204ENST00000377107 NPHS2Q9NP85 383 aa13.62□□□□□ -0.23
USP11-204ENST00000377107 GREB1LQ9C091 1923 aaPredicted RBP13.61□□□□□ -0.23
USP11-204ENST00000377107 A0A0B4J269 797 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 A0A0G2JND7 137 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 SPDYE16A6NNV3 312 aaPredicted RBP13.61□□□□□ -0.23
USP11-204ENST00000377107 SPATA31C2B4DYI2 1134 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 TP73O15350 636 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 ATP6V1G2O95670 118 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 CALB1P05937 261 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 ALDH5A1P51649 535 aaPredicted RBP13.61□□□□□ -0.23
USP11-204ENST00000377107 CAV1Q03135 178 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 ACCSLQ4AC99 568 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 OR6B2Q6IFH4 312 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 DARS2Q6PI48 645 aaKnown RBP13.61□□□□□ -0.23
USP11-204ENST00000377107 TRIM72Q6ZMU5 477 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 AEBP2Q6ZN18 517 aaPredicted RBP13.61□□□□□ -0.23
USP11-204ENST00000377107 TMEM192Q8IY95 271 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 C12orf50Q8NA57 414 aaPredicted RBP13.61□□□□□ -0.23
USP11-204ENST00000377107 RDM1Q8NG50 284 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 TRPM4Q8TD43 1214 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 FBF1Q8TES7 1133 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 CFAP36Q96G28 342 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 R3HDMLQ9H3Y0 253 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 NGRNQ9NPE2 291 aaKnown RBP13.61□□□□□ -0.23
USP11-204ENST00000377107 GPATCH2LQ9NWQ4 482 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 LTBP1Q14766 1721 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 NRXN2Q9P2S2 1712 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 STBD1O95210 358 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 SESN3P58005 492 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 IRX4P78413 519 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 LMNB2Q03252 620 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 RNASELQ05823 741 aaKnown RBP13.61□□□□□ -0.23
USP11-204ENST00000377107 HSDL1Q3SXM5 330 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 BSPRYQ5W0U4 402 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 PPP1R21Q6ZMI0 780 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 KATNAL2Q8IYT4 538 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 CKAP2Q8WWK9 683 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 NIF3L1Q9GZT8 377 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 HAO1Q9UJM8 370 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 AFG3L2Q9Y4W6 797 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 LRRC37AA6NMS7 1700 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 M0QYV0 167 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 RNF8O76064 485 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 YY1P25490 414 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 GDF10P55107 478 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 ITIH4Q14624 930 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 PPP6R3Q5H9R7 873 aaPredicted RBP13.61□□□□□ -0.23
USP11-204ENST00000377107 ZNF667Q5HYK9 610 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 FAM102AQ5T9C2 384 aaPredicted RBP13.61□□□□□ -0.23
USP11-204ENST00000377107 FAM160B1Q5W0V3 765 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 EEF1DP3Q658K8 133 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 LVRNQ6Q4G3 990 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 NPNTQ6UXI9 565 aa13.61□□□□□ -0.23
USP11-204ENST00000377107 TTC17Q96AE7 1141 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms