RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 DNAAF5Q86Y56 855 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 LRRC43Q8N309 656 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 HASPINQ8TF76 798 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 ZNF606Q8WXB4 792 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 TMEM176AQ96HP8 235 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 FAM193BQ96PV7 902 aaPredicted RBP11.14□□□□□ -0.63
PDPN-203ENST00000376061 NT5C1AQ9BXI3 368 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 NRDE2Q9H7Z3 1164 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 LUC7LQ9NQ29 371 aaKnown RBP11.14□□□□□ -0.63
PDPN-203ENST00000376061 RRAGDQ9NQL2 400 aaPredicted RBP11.14□□□□□ -0.63
PDPN-203ENST00000376061 PRKAG2Q9UGJ0 569 aa11.14□□□□□ -0.63
PDPN-203ENST00000376061 PUF60Q9UHX1 559 aaKnown RBP11.14□□□□□ -0.63
PDPN-203ENST00000376061 FAM170AA1A519 330 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 TMCO5BA8MYB1 307 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 PJA2O43164 708 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 DGKIO75912 1065 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 UPP2O95045 317 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 AMHP03971 560 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 H2AFZP0C0S5 128 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 CD19P15391 556 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 PAX3P23760 479 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 SSTR3P32745 418 aaPredicted RBP11.13□□□□□ -0.63
PDPN-203ENST00000376061 BRCC3P46736 316 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 EMP3P54852 163 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 NOMO3P69849 1222 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 FPGSQ05932 587 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 PPIGQ13427 754 aaKnown RBP eCLIP11.13□□□□□ -0.63
PDPN-203ENST00000376061 ARHGAP29Q52LW3 1261 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 WSCD1Q658N2 575 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 DSTYKQ6XUX3 929 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 H2AFVQ71UI9 128 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 C16orf59Q7L2K0 433 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 DPH6Q7L8W6 267 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 UNC93AQ86WB7 457 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 PASD1Q8IV76 773 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 OR6B3Q8NGW1 331 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 BADQ92934 168 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 C16orf45Q96MC5 204 aaPredicted RBP11.13□□□□□ -0.63
PDPN-203ENST00000376061 TSGA10Q9BZW7 698 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 SNX25Q9H3E2 840 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 DPEP3Q9H4B8 488 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 RC3H2Q9HBD1 1191 aaKnown RBP11.13□□□□□ -0.63
PDPN-203ENST00000376061 PCDHB8Q9UN66 801 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 PCDHGC3Q9UN70 934 aa11.13□□□□□ -0.63
PDPN-203ENST00000376061 PRG3Q9Y2Y8 225 aaPredicted RBP11.13□□□□□ -0.63
PDPN-203ENST00000376061 NLRC5Q86WI3 1866 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 PTPRDP23468 1912 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 A8MXQ7 604 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 M0QZQ0 153 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 O00370 1275 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 GABRDO14764 452 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 MED7O43513 233 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 RTN2O75298 545 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 LSM8O95777 96 aaKnown RBP11.12□□□□□ -0.63
PDPN-203ENST00000376061 CYP1A1P04798 512 aaPredicted RBP11.12□□□□□ -0.63
PDPN-203ENST00000376061 FAM163BP0C2L3 166 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 VDRP11473 427 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 ODC1P11926 461 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 GZMAP12544 262 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 UNGP13051 313 aaPredicted RBP11.12□□□□□ -0.63
PDPN-203ENST00000376061 LMO2P25791 158 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 OR1G1P47890 313 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 SLC11A1P49279 550 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 EPHB4P54760 987 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 GALCP54803 685 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 CENPCQ03188 943 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 KIF5AQ12840 1032 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 SGO2Q562F6 1265 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 NAA35Q5VZE5 725 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 DENND1BQ6P3S1 775 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 TMCO2Q7Z6W1 182 aaPredicted RBP11.12□□□□□ -0.63
PDPN-203ENST00000376061 ACOT1Q86TX2 421 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 TMEM86AQ8N2M4 240 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 TXLNBQ8N3L3 684 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 TOP1MTQ969P6 601 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 ABHD8Q96I13 439 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 SUSD3Q96L08 255 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 HEXIM2Q96MH2 286 aaKnown RBP11.12□□□□□ -0.63
PDPN-203ENST00000376061 HTATIP2Q9BUP3 242 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 ISCUQ9H1K1 167 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 PDCL3Q9H2J4 239 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 MARCH5Q9NX47 278 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 INTUQ9ULD6 942 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.12□□□□□ -0.63
PDPN-203ENST00000376061 STXBP5LQ9Y2K9 1186 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 DUSP10Q9Y6W6 482 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 NCANO14594 1321 aa11.12□□□□□ -0.63
PDPN-203ENST00000376061 MYH10P35580 1976 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 PATJQ8NI35 1801 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 KRT86O43790 486 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 MICAL2O94851 1124 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 FTLP02792 175 aaPredicted RBP11.11□□□□□ -0.63
PDPN-203ENST00000376061 CYP11A1P05108 521 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 PDGFRBP09619 1106 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 TMEM253P0C7T8 217 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 SYN1P17600 705 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 CDH5P33151 784 aaPredicted RBP11.11□□□□□ -0.63
PDPN-203ENST00000376061 GNL1P36915 607 aaPredicted RBP11.11□□□□□ -0.63
PDPN-203ENST00000376061 PTPN14Q15678 1187 aa11.11□□□□□ -0.63
PDPN-203ENST00000376061 CCDC142Q17RM4 750 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms