RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 ZACNQ401N2 412 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 TMEM31Q5JXX7 168 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 KBTBD7Q8WVZ9 684 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 FGF13Q92913 245 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 EEF2KMTQ96G04 330 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 IPO9Q96P70 1041 aaKnown RBP23.33■■□□□ 1.33
NINJ1-201ENST00000375446 KCNK12Q9HB15 430 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 TMLHEQ9NVH6 421 aa23.33■■□□□ 1.33
NINJ1-201ENST00000375446 PSMA7O14818 248 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 GPR37L1O60883 481 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 SOAT2O75908 522 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 VNN1O95497 513 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 WARSP23381 471 aaKnown RBP23.32■■□□□ 1.32
NINJ1-201ENST00000375446 TUFMP49411 452 aaKnown RBP23.32■■□□□ 1.32
NINJ1-201ENST00000375446 PMS1P54277 932 aaKnown RBP23.32■■□□□ 1.32
NINJ1-201ENST00000375446 ENPEPQ07075 957 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 MORC3Q14149 939 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 NFE2Q16621 373 aaPredicted RBP23.32■■□□□ 1.32
NINJ1-201ENST00000375446 SLC5A9Q2M3M2 681 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 INTS6LQ5JSJ4 861 aaKnown RBP23.32■■□□□ 1.32
NINJ1-201ENST00000375446 ANKRD40Q6AI12 368 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 SV2AQ7L0J3 742 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 SPPL2BQ8TCT7 592 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 SEPT5Q99719 369 aaPredicted RBP23.32■■□□□ 1.32
NINJ1-201ENST00000375446 MKNK1Q9BUB5 465 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 DNAJC25Q9H1X3 360 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 VRTNQ9H8Y1 702 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 ABI2Q9NYB9 513 aaPredicted RBP23.32■■□□□ 1.32
NINJ1-201ENST00000375446 IGSF9Q9P2J2 1179 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 NXF1Q9UBU9 619 aaKnown RBP23.32■■□□□ 1.32
NINJ1-201ENST00000375446 PCDHB5Q9Y5E4 795 aa23.32■■□□□ 1.32
NINJ1-201ENST00000375446 BIN1O00499 593 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 HCRTO43612 131 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 FAM163BP0C2L3 166 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 TRIM49P0CI25 452 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 TRIM49CP0CI26 452 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 CD44P16070 742 aaKnown RBP23.31■■□□□ 1.32
NINJ1-201ENST00000375446 BMP6P22004 513 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 PPP1R2P41236 205 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 LRRC63Q05C16 580 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 MTMR3Q13615 1198 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 ZNF699Q32M78 642 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 MGAT5BQ3V5L5 792 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 CYP4A22Q5TCH4 519 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 PDZD4Q76G19 769 aaPredicted RBP23.31■■□□□ 1.32
NINJ1-201ENST00000375446 NPAS3Q8IXF0 933 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 HS6ST3Q8IZP7 471 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 ING5Q8WYH8 240 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 DHTKD1Q96HY7 919 aaPredicted RBP23.31■■□□□ 1.32
NINJ1-201ENST00000375446 PKMYT1Q99640 499 aa23.31■■□□□ 1.32
NINJ1-201ENST00000375446 ZNF197O14709 1029 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 TACC1O75410 805 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 HAPLN1P10915 354 aaPredicted RBP23.3■■□□□ 1.32
NINJ1-201ENST00000375446 EPB41P11171 864 aaKnown RBP23.3■■□□□ 1.32
NINJ1-201ENST00000375446 CCNE1P24864 410 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 LMO2P25791 158 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 FKBP3Q00688 224 aaKnown RBP23.3■■□□□ 1.32
NINJ1-201ENST00000375446 CAMK4Q16566 473 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 PRSS36Q5K4E3 855 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 TRIM67Q6ZTA4 783 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 ZC3H3Q8IXZ2 948 aaKnown RBP23.3■■□□□ 1.32
NINJ1-201ENST00000375446 UBALD2Q8IYN6 164 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 LEMD2Q8NC56 503 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 SYT15Q9BQS2 421 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 MRPL45Q9BRJ2 306 aaKnown RBP23.3■■□□□ 1.32
NINJ1-201ENST00000375446 SNX25Q9H3E2 840 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 ASAH2Q9NR71 780 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 GTF3C4Q9UKN8 822 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 CDH9Q9ULB4 789 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 ASB3Q9Y575 518 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 DOCK6Q96HP0 2047 aa23.3■■□□□ 1.32
NINJ1-201ENST00000375446 TRIM49BA6NDI0 452 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 ANHXE9PGG2 379 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 CLSTN1O94985 981 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 CEBPBP17676 345 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 GCLMP48507 274 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 EPHA5P54756 1037 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 MCCD1P59942 119 aaPredicted RBP23.29■■□□□ 1.32
NINJ1-201ENST00000375446 PPP3CAQ08209 521 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 TDGQ13569 410 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 SGSM1Q2NKQ1 1148 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 ZNF667Q5HYK9 610 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 RSAD2Q8WXG1 361 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 NXPE3Q969Y0 559 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 TCEAL4Q96EI5 215 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 LRFN3Q9BTN0 628 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 SMOC2Q9H3U7 446 aa23.29■■□□□ 1.32
NINJ1-201ENST00000375446 MYBPHLA2RUH7 354 aa23.28■■□□□ 1.32
NINJ1-201ENST00000375446 PPP1R3GB7ZBB8 358 aa23.28■■□□□ 1.32
NINJ1-201ENST00000375446 SLC16A3O15427 465 aaKnown RBP23.28■■□□□ 1.32
NINJ1-201ENST00000375446 MICAL2O94851 1124 aa23.28■■□□□ 1.32
NINJ1-201ENST00000375446 HLA-DRAP01903 254 aa23.28■■□□□ 1.32
NINJ1-201ENST00000375446 PDGFRBP09619 1106 aa23.28■■□□□ 1.32
NINJ1-201ENST00000375446 MYL4P12829 197 aa23.28■■□□□ 1.32
NINJ1-201ENST00000375446 ATF6P18850 670 aa23.28■■□□□ 1.32
NINJ1-201ENST00000375446 GNL1P36915 607 aaPredicted RBP23.28■■□□□ 1.32
NINJ1-201ENST00000375446 CCR2P41597 374 aa23.28■■□□□ 1.32
NINJ1-201ENST00000375446 PIK3CAP42336 1068 aa23.28■■□□□ 1.32
NINJ1-201ENST00000375446 SIGLEC14Q08ET2 396 aa23.28■■□□□ 1.32
NINJ1-201ENST00000375446 HTR4Q13639 388 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms