RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CCNB1IP1Q9NPC3 277 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 HPS4Q9NQG7 708 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 KLHL18O94889 574 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 TNNI1P19237 187 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 PLET1Q6UQ28 207 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 C6orf62Q9GZU0 229 aaPredicted RBP6.88□□□□□ -1.31
UBR4-204ENST00000375254 EXOSC4Q9NPD3 245 aaKnown RBP6.88□□□□□ -1.31
UBR4-204ENST00000375254 TRDMT1O14717 391 aaKnown RBP6.88□□□□□ -1.31
UBR4-204ENST00000375254 NFYCQ13952 458 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 CLIC6Q96NY7 704 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 FGD6Q6ZV73 1430 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 RGSL1A5PLK6 1076 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 CAMTA2O94983 1202 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 FTLP02792 175 aaPredicted RBP6.88□□□□□ -1.31
UBR4-204ENST00000375254 NR2F2P24468 414 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 MAGEB6Q8N7X4 407 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 ZNF224Q9NZL3 707 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 C15orf38-AP3S2A0A0A6YYH1 394 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 SEC24AO95486 1093 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 DHFRP00374 187 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 ITGB3P05106 788 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 MSR1P21757 451 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 AP3S2P59780 193 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 UQCC2Q9BRT2 126 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 GPR108Q9NPR9 543 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 HESX1Q9UBX0 185 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 PIPSLA2A3N6 862 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 SMNDC1O75940 238 aaKnown RBP eCLIP6.88□□□□□ -1.317e-12■■■□□ 17.8
UBR4-204ENST00000375254 KRT36O76013 467 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 IREB2P48200 963 aaKnown RBP6.88□□□□□ -1.31
UBR4-204ENST00000375254 USP4Q13107 963 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 GUF1Q8N442 669 aaKnown RBP6.88□□□□□ -1.31
UBR4-204ENST00000375254 TCEAL7Q9BRU2 100 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 MTG1Q9BT17 334 aaPredicted RBP6.88□□□□□ -1.31
UBR4-204ENST00000375254 TRIM54Q9BYV2 358 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 EHD3Q9NZN3 535 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 UHRF1BP1Q6BDS2 1440 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 MAST3O60307 1309 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 DNAJB5O75953 348 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 FKBP9O95302 570 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 KCNMA1Q12791 1236 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 MDH1BQ5I0G3 518 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 ZBTB21Q9ULJ3 1066 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 CD151P48509 253 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 TNNI3KQ59H18 835 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 RDH13Q8NBN7 331 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 HM13Q8TCT9 377 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 CHCHD6Q9BRQ6 235 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 SLC39A2Q9NP94 309 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 PCDHGA11Q9Y5H2 935 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 FPGT-TNNI3KV9GXZ4 949 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 THRBP10828 461 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 PSMD4P55036 377 aaKnown RBP6.88□□□□□ -1.31
UBR4-204ENST00000375254 AMPD2Q01433 879 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 UBE3CQ15386 1083 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 NIPAL1Q6NVV3 410 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 KYAT3Q6YP21 454 aaKnown RBP6.88□□□□□ -1.31
UBR4-204ENST00000375254 KRT78Q8N1N4 520 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 EDC3Q96F86 508 aaKnown RBP6.88□□□□□ -1.31
UBR4-204ENST00000375254 ZCWPW1Q9H0M4 648 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 ZDHHC9Q9Y397 364 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 MOGQ16653 247 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 FAM47CQ5HY64 1035 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 DUS1LQ6P1R4 473 aaKnown RBP6.88□□□□□ -1.31
UBR4-204ENST00000375254 ADHFE1Q8IWW8 467 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 TATDN2Q93075 761 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 ACCSQ96QU6 501 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 TRNAU1APQ9NX07 287 aaKnown RBP6.88□□□□□ -1.31
UBR4-204ENST00000375254 NTRK1P04629 796 aa6.88□□□□□ -1.31
UBR4-204ENST00000375254 RALGDSQ12967 914 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 PABPC1LQ4VXU2 614 aaKnown RBP6.87□□□□□ -1.31
UBR4-204ENST00000375254 C12orf56Q8IXR9 622 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 GDF3Q9NR23 364 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 SNRKQ9NRH2 765 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 SCRIBQ14160 1630 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 MAGEC1O60732 1142 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 CD2BP2O95400 341 aaKnown RBP6.87□□□□□ -1.31
UBR4-204ENST00000375254 RBM43Q6ZSC3 357 aaKnown RBP6.87□□□□□ -1.31
UBR4-204ENST00000375254 LHFPL3Q86UP9 236 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 GPCPD1Q9NPB8 672 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 TMOD3Q9NYL9 352 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 ADD3Q9UEY8 706 aaKnown RBP6.87□□□□□ -1.31
UBR4-204ENST00000375254 ZC3H7BQ9UGR2 993 aaKnown RBP6.87□□□□□ -1.31
UBR4-204ENST00000375254 TNKSO95271 1327 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 LOC100653049A0A140TA62 436 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 AKAP8O43823 692 aaKnown RBP6.87□□□□□ -1.31
UBR4-204ENST00000375254 TMCC2O75069 709 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 KRT34O76011 436 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 ARHGDIBP52566 201 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 NFE2L1Q14494 772 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 FAM47AQ5JRC9 791 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 PMF1Q6P1K2 205 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 MKNK1Q9BUB5 465 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 CATSPERZQ9NTU4 200 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 ME2P23368 584 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 PPP1R15BQ5SWA1 713 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 AFG1LQ8WV93 481 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 RIN2Q8WYP3 895 aaPredicted RBP6.87□□□□□ -1.31
UBR4-204ENST00000375254 ARL5BQ96KC2 179 aa6.87□□□□□ -1.31
UBR4-204ENST00000375254 ZSCAN10Q96SZ4 725 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms