RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ODF2Q5BJF6 829 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 HHIPL2Q6UWX4 724 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 GRIN3AQ8TCU5 1115 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 TCF25Q9BQ70 676 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 ZMYND8Q9ULU4 1186 aaPredicted RBP9.54□□□□□ -0.88
UBR4-201ENST00000375218 ATP8B3O60423 1300 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 MYO3BQ8WXR4 1341 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 TARSL2A2RTX5 802 aaKnown RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 EVI5O60447 810 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 LRRN2O75325 713 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 TM4SF1P30408 202 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 PPP5CP53041 499 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 RALGDSQ12967 914 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 SLC14A1Q13336 389 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 ALG11Q2TAA5 492 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 SLC10A6Q3KNW5 377 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 CAVIN1Q6NZI2 390 aaKnown RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 RAB11FIP2Q7L804 512 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 CARFQ8N187 725 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 CPA6Q8N4T0 437 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 NANOS1Q8WY41 292 aaKnown RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 NXPE3Q969Y0 559 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 ZUFSPQ96AP4 578 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 UHRF1Q96T88 793 aaPredicted RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 PANK2Q9BZ23 570 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 STN1Q9H668 368 aaKnown RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 AGO4Q9HCK5 861 aaKnown RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 PDE11AQ9HCR9 933 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 IL20Q9NYY1 176 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 DCDC2CA8MYV0 355 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 ALDH1A2O94788 518 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 ZFYP08048 801 aaPredicted RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 DLATP10515 647 aaKnown RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 NFKBIAP25963 317 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 MAP3K7CLP57077 242 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 NECAB2Q7Z6G3 386 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 SPATA24Q86W54 205 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 USP13Q92995 863 aaPredicted RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 FTOQ9C0B1 505 aaKnown RBP eCLIP9.53□□□□□ -0.88
UBR4-201ENST00000375218 TLR3O15455 904 aaKnown RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 ASGR1P07306 291 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 CSF1RP07333 972 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 AFF1P51825 1210 aaKnown RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 ITGA7Q13683 1181 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 FAM98CQ17RN3 349 aaKnown RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 MCMDC2Q4G0Z9 681 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 PGM2L1Q6PCE3 622 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 ASB3Q9Y575 518 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 GRM8O00222 908 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 SULT1B1O43704 296 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 PAPLNO95428 1278 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 DHRS4L1P0CG22 281 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 PRKACBP22694 351 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 ATN1P54259 1190 aaPredicted RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 PLCL1Q15111 1095 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 C5orf22Q49AR2 442 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 YOD1Q5VVQ6 348 aaPredicted RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 PIWIL3Q7Z3Z3 882 aaKnown RBP9.53□□□□□ -0.88
UBR4-201ENST00000375218 BNIPLQ7Z465 357 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 GPR149Q86SP6 731 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 SPARTQ8N0X7 666 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 SLC4A11Q8NBS3 891 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 COQ7Q99807 217 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 APOL6Q9BWW8 343 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 AMACRQ9UHK6 382 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 CYTH4Q9UIA0 394 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 PCDHGC3Q9UN70 934 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 FPGT-TNNI3KV9GXZ4 949 aa9.53□□□□□ -0.88
UBR4-201ENST00000375218 PSME4Q14997 1843 aa9.52□□□□□ -0.88
UBR4-201ENST00000375218 ATP8B1O43520 1251 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 STRNO43815 780 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 FMO6PO60774 539 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 LTFP02788 710 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 RPL9P32969 192 aaKnown RBP9.52□□□□□ -0.89
UBR4-201ENST00000375218 LASP1Q14847 261 aaKnown RBP9.52□□□□□ -0.89
UBR4-201ENST00000375218 MTFR2Q6P444 385 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 ERMP1Q7Z2K6 904 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 R3HCC1LQ7Z5L2 792 aaKnown RBP9.52□□□□□ -0.89
UBR4-201ENST00000375218 ZNF589Q86UQ0 364 aaPredicted RBP9.52□□□□□ -0.89
UBR4-201ENST00000375218 PTRH1Q86Y79 214 aaKnown RBP9.52□□□□□ -0.89
UBR4-201ENST00000375218 ZNF34Q8IZ26 560 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 TOR1AIP2Q8NFQ8 470 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 MYCBPAPQ8TBZ2 947 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 CACTINQ8WUQ7 758 aaKnown RBP9.52□□□□□ -0.89
UBR4-201ENST00000375218 GAL3ST1Q99999 423 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 HAUS4Q9H6D7 363 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 MOCS1Q9NZB8 636 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 TIAM2Q8IVF5 1701 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 TNFSF4P23510 183 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 HTRA3P83110 453 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 PTH1RQ03431 593 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 ZNF124Q15973 351 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 RNF219Q5W0B1 726 aaPredicted RBP9.52□□□□□ -0.89
UBR4-201ENST00000375218 FCRLBQ6BAA4 426 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 IYDQ6PHW0 289 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 OR2C3Q8N628 320 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 ZSWIM2Q8NEG5 633 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 GDAP1Q8TB36 358 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 KIFAP3Q92845 792 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 NAALAD2Q9Y3Q0 740 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms