RNA–Protein interactions for RNA: ENST00000373292.8

HDLBP-202, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-202ENST00000373292 KRIT1O00522 736 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 RFC1P35251 1148 aaPredicted RBP11.81□□□□□ -0.52
HDLBP-202ENST00000373292 MLH1P40692 756 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 KCNJ1P48048 391 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 PTPN11Q06124 597 aaPredicted RBP11.81□□□□□ -0.52
HDLBP-202ENST00000373292 MBTPS1Q14703 1052 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 PTGISQ16647 500 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 LHX8Q68G74 356 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 PRUNE1Q86TP1 453 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 SH3TC2Q8TF17 1288 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 TMEM176AQ96HP8 235 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 CCDC94Q9BW85 323 aaPredicted RBP11.81□□□□□ -0.52
HDLBP-202ENST00000373292 ADAM33Q9BZ11 813 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 LRRC4CQ9HCJ2 640 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 PGRMC1O00264 195 aaKnown RBP11.81□□□□□ -0.52
HDLBP-202ENST00000373292 SPOPO43791 374 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 HEXIM1O94992 359 aaKnown RBP11.81□□□□□ -0.52
HDLBP-202ENST00000373292 CTNNA1P35221 906 aaKnown RBP11.81□□□□□ -0.52
HDLBP-202ENST00000373292 IFI16Q16666 785 aaKnown RBP11.81□□□□□ -0.52
HDLBP-202ENST00000373292 PPP1R15BQ5SWA1 713 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 KIAA0319Q5VV43 1072 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 C8orf74Q6P047 294 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 TTC30AQ86WT1 665 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 FMNL3Q8IVF7 1028 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 SYCE1Q8N0S2 351 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 PRELID2Q8N945 189 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 ZNF784Q8NCA9 323 aaPredicted RBP11.81□□□□□ -0.52
HDLBP-202ENST00000373292 ZNF296Q8WUU4 475 aaPredicted RBP11.81□□□□□ -0.52
HDLBP-202ENST00000373292 ATG4AQ8WYN0 398 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 HEXIM2Q96MH2 286 aaKnown RBP11.81□□□□□ -0.52
HDLBP-202ENST00000373292 HEMGNQ9BXL5 484 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 B3GNT5Q9BYG0 378 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 ARFGAP3Q9NP61 516 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 NFU1Q9UMS0 254 aa11.81□□□□□ -0.52
HDLBP-202ENST00000373292 PI4K2BG5E9Z4 385 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 TLR3O15455 904 aaKnown RBP11.8□□□□□ -0.52
HDLBP-202ENST00000373292 B4GALT3O60512 393 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 GRAP2O75791 330 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 ATF7P17544 494 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-202ENST00000373292 GPD2P43304 727 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 RGS7P49802 495 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 BPIFB4P59827 614 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 ITIH3Q06033 890 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 TSEN2Q8NCE0 465 aaKnown RBP11.8□□□□□ -0.52
HDLBP-202ENST00000373292 DDX27Q96GQ7 796 aaKnown RBP11.8□□□□□ -0.52
HDLBP-202ENST00000373292 GAD1Q99259 594 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 KATNAL1Q9BW62 490 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 MAGEB5Q9BZ81 275 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 VRTNQ9H8Y1 702 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 STIM2Q9P246 746 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 ITGA11Q9UKX5 1188 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 R3HDM2Q9Y2K5 976 aaKnown RBP11.8□□□□□ -0.52
HDLBP-202ENST00000373292 PCDHA3Q9Y5H8 950 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 TIMM13Q9Y5L4 95 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-202ENST00000373292 I3L4J1 428 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 PIRO00625 290 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 MAP2K7O14733 419 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 DCAF4L1Q3SXM0 396 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 PAN2Q504Q3 1202 aaKnown RBP11.8□□□□□ -0.52
HDLBP-202ENST00000373292 AGMOQ6ZNB7 445 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 CLEC4CQ8WTT0 213 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 IFT81Q8WYA0 676 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 PBKQ96KB5 322 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 UVRAGQ9P2Y5 699 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.8□□□□□ -0.52
HDLBP-202ENST00000373292 CCDC130P13994 396 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 RBP5P82980 135 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 PMF1Q6P1K2 205 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 NDRG1Q92597 394 aaKnown RBP11.8□□□□□ -0.52
HDLBP-202ENST00000373292 TRIM31Q9BZY9 425 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 TSPAN16Q9UKR8 245 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 PADI3Q9ULW8 664 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 PCDHGC3Q9UN70 934 aa11.8□□□□□ -0.52
HDLBP-202ENST00000373292 ZNF638Q14966 1978 aaKnown RBP11.79□□□□□ -0.52
HDLBP-202ENST00000373292 TMEM191CA6NGB0 347 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 RPS6KA5O75582 802 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 RARAP10276 462 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 TFE3P19532 575 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-202ENST00000373292 ACAT1P24752 427 aaKnown RBP11.79□□□□□ -0.52
HDLBP-202ENST00000373292 IL1R2P27930 398 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 CDH5P33151 784 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-202ENST00000373292 APLP1P51693 650 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 INCA1Q0VD86 236 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 XKR4Q5GH76 650 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 KCNT1Q5JUK3 1230 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 CTU1Q7Z7A3 348 aaKnown RBP11.79□□□□□ -0.52
HDLBP-202ENST00000373292 OSTM1Q86WC4 334 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 CARD9Q9H257 536 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 AVENQ9NQS1 362 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-202ENST00000373292 M0QYV0 167 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 ALDH1A1P00352 501 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 ACLYP53396 1101 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 ITGA7Q13683 1181 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 LPIN1Q14693 890 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 CASP8Q14790 479 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 BRD3Q15059 726 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 TRIM71Q2Q1W2 868 aaKnown RBP11.79□□□□□ -0.52
HDLBP-202ENST00000373292 SMTNL2Q2TAL5 461 aa11.79□□□□□ -0.52
HDLBP-202ENST00000373292 RTN4RL1Q86UN2 441 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-202ENST00000373292 XYLT1Q86Y38 959 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms