RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 LZTS3O60299 673 aaPredicted RBP12.02□□□□□ -0.48
VCL-202ENST00000372755 NR3C2P08235 984 aa12.02□□□□□ -0.48
VCL-202ENST00000372755 MTF1Q14872 753 aa12.02□□□□□ -0.48
VCL-202ENST00000372755 STRIP1Q5VSL9 837 aa12.02□□□□□ -0.48
VCL-202ENST00000372755 LUZP2Q86TE4 346 aa12.02□□□□□ -0.48
VCL-202ENST00000372755 ZNF280CQ8ND82 737 aa12.02□□□□□ -0.48
VCL-202ENST00000372755 NSUN4Q96CB9 384 aaKnown RBP12.02□□□□□ -0.48
VCL-202ENST00000372755 MKNK1Q9BUB5 465 aa12.02□□□□□ -0.48
VCL-202ENST00000372755 MOV10L1Q9BXT6 1211 aaKnown RBP12.02□□□□□ -0.48
VCL-202ENST00000372755 NIF3L1Q9GZT8 377 aa12.02□□□□□ -0.48
VCL-202ENST00000372755 MANSC1Q9H8J5 431 aa12.02□□□□□ -0.48
VCL-202ENST00000372755 CRLS1Q9UJA2 301 aa12.02□□□□□ -0.48
VCL-202ENST00000372755 MAFGO15525 162 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 KIF1CO43896 1103 aaKnown RBP12.02□□□□□ -0.49
VCL-202ENST00000372755 C6orf222P0C671 652 aaPredicted RBP12.02□□□□□ -0.49
VCL-202ENST00000372755 FDFT1P37268 417 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 PTGER2P43116 358 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 CSTF3Q12996 717 aaKnown RBP12.02□□□□□ -0.49
VCL-202ENST00000372755 CHSY1Q86X52 802 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 ERP27Q96DN0 273 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 CINPQ9BW66 212 aaPredicted RBP12.02□□□□□ -0.49
VCL-202ENST00000372755 ZFYVE28Q9HCC9 887 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 ZCCHC17Q9NP64 241 aaKnown RBP12.02□□□□□ -0.49
VCL-202ENST00000372755 CEP170Q5SW79 1584 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 MAP3K13O43283 966 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 CYP2C8P10632 490 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 CENPAP49450 140 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 PRKCEQ02156 737 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 XRRA1Q6P2D8 792 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 CCNI2Q6ZMN8 369 aaPredicted RBP12.02□□□□□ -0.49
VCL-202ENST00000372755 ATP6V0D2Q8N8Y2 350 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 EIF3LQ9Y262 564 aaKnown RBP12.02□□□□□ -0.49
VCL-202ENST00000372755 B2RBV5 119 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 ALDH1A2O94788 518 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 SLC2A3P11169 496 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 ALOX15P16050 662 aaPredicted RBP12.02□□□□□ -0.49
VCL-202ENST00000372755 ALDH1A3P47895 512 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 LRRC36Q1X8D7 754 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 CEP78Q5JTW2 689 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 IYDQ6PHW0 289 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 MARCH10Q8NA82 808 aaPredicted RBP12.02□□□□□ -0.49
VCL-202ENST00000372755 AGBL1Q96MI9 1066 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 CACNA2D2Q9NY47 1150 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 SNTNA6NMZ2 147 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 MYBP10242 640 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 CNTN1Q12860 1018 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 FAM83EQ2M2I3 478 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 PRPF39Q86UA1 669 aaKnown RBP12.02□□□□□ -0.49
VCL-202ENST00000372755 CYFIP2Q96F07 1278 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 SLITRK1Q96PX8 696 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 FRMD8P1Q9BZ68 369 aaPredicted RBP12.02□□□□□ -0.49
VCL-202ENST00000372755 USE1Q9NZ43 259 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 IGSF9BQ9UPX0 1349 aa12.02□□□□□ -0.49
VCL-202ENST00000372755 GUCY1A2P33402 732 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 LVRNQ6Q4G3 990 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 BRINP3Q76B58 766 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 TRPM8Q7Z2W7 1104 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 MICALL2Q8IY33 904 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 SEC16BQ96JE7 1060 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 RRN3P2A6NIE6 340 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 F8W810 466 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 COMTP21964 271 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 ITGA8P53708 1063 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 FOXO4P98177 505 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 DCAF6Q58WW2 860 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 CACHD1Q5VU97 1274 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 GALNT4Q8N4A0 578 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 NSL1Q96IY1 281 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 VPS50Q96JG6 964 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 CCT7Q99832 543 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 FAM49BQ9NUQ9 324 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 DAGLAQ9Y4D2 1042 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 FHOD1Q9Y613 1164 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 FLT1P17948 1338 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 ZBTB7AO95365 584 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 GEMIN4P57678 1058 aaKnown RBP12.01□□□□□ -0.49
VCL-202ENST00000372755 EXOSC10Q01780 885 aaKnown RBP12.01□□□□□ -0.49
VCL-202ENST00000372755 PLOD1Q02809 727 aaPredicted RBP12.01□□□□□ -0.49
VCL-202ENST00000372755 TBL3Q12788 808 aaKnown RBP12.01□□□□□ -0.49
VCL-202ENST00000372755 TRIP4Q15650 581 aaPredicted RBP12.01□□□□□ -0.49
VCL-202ENST00000372755 TDRD10Q5VZ19 366 aaKnown RBP12.01□□□□□ -0.49
VCL-202ENST00000372755 GPAT2Q6NUI2 795 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 FEZF2Q8TBJ5 459 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 DNAJC9Q8WXX5 260 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 IL17RAQ96F46 866 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 FAR2Q96K12 515 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 CRAMP1Q96RY5 1269 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 RIT2Q99578 217 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 WWOXQ9NZC7 414 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 SPASTQ9UBP0 616 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 SPACA6W5XKT8 324 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 PHF20L1A8MW92 1017 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 HBP1O60381 514 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 NDUFB10O96000 172 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 GEMP55040 296 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 KYNUQ16719 465 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 SGO1Q5FBB7 561 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 ELOA2Q8IYF1 753 aaPredicted RBP12.01□□□□□ -0.49
VCL-202ENST00000372755 ADAM33Q9BZ11 813 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 CST8O60676 142 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms