RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 ATP9BO43861 1147 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 F9P00740 461 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 RHBDL3P58872 404 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 STX3Q13277 289 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 NT5DC4Q86YG4 428 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 SH2D3CQ8N5H7 860 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 CATSPER1Q8NEC5 780 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 ATP8B4Q8TF62 1192 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 THOC1Q96FV9 657 aaKnown RBP10.96□□□□□ -0.65
NUP188-201ENST00000372577 CLMNQ96JQ2 1002 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 CELF4Q9BZC1 486 aaKnown RBP10.96□□□□□ -0.65
NUP188-201ENST00000372577 TMEM51Q9NW97 253 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 SMARCAL1Q9NZC9 954 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 LSM7Q9UK45 103 aaKnown RBP10.96□□□□□ -0.65
NUP188-201ENST00000372577 ABCC6O95255 1503 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 CCDC195A0A1B0GUA6 201 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 VWA5AO00534 786 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 CYTH3O43739 400 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 MGEA5O60502 916 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 PDGFRBP09619 1106 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 DDX5P17844 614 aaKnown RBP10.96□□□□□ -0.65
NUP188-201ENST00000372577 SLC12A3P55017 1021 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 C3orf62Q6ZUJ4 267 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 SRLQ86TD4 932 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 FGD4Q96M96 766 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 SPON2Q9BUD6 331 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 GRID1Q9ULK0 1009 aa10.96□□□□□ -0.65
NUP188-201ENST00000372577 LRRIQ3A6PVS8 624 aaPredicted RBP10.96□□□□□ -0.66
NUP188-201ENST00000372577 KITP10721 976 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 MCF2P10911 925 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 IRAK1P51617 712 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 NSUN2Q08J23 767 aaKnown RBP eCLIP10.96□□□□□ -0.66
NUP188-201ENST00000372577 STKLD1Q8NE28 680 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 PARD3BQ8TEW8 1205 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 APBB2Q92870 758 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 CCDC138Q96M89 665 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 NAT9Q9BTE0 207 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 KCNMB3Q9NPA1 279 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.96□□□□□ -0.66
NUP188-201ENST00000372577 L1RE1Q9UN81 338 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 CAMTA1Q9Y6Y1 1673 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 TMEM247A6NEH6 219 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 GPR182O15218 404 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 FBXO21O94952 628 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 ARHGDIAP52565 204 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 PMS1P54277 932 aaKnown RBP10.96□□□□□ -0.66
NUP188-201ENST00000372577 CCNG2Q16589 344 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 KYNUQ16719 465 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 IMPG1Q17R60 797 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 ASIC4Q96FT7 647 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 PNKPQ96T60 521 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 LACRTQ9GZZ8 138 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 ITGA11Q9UKX5 1188 aa10.96□□□□□ -0.66
NUP188-201ENST00000372577 FAM86B1E9PN63 330 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 TOMM70O94826 608 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 KLHL2O95198 593 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 CYBBP04839 570 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 APOA4P06727 396 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 FAM86B2P0C5J1 330 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 PRAMEF18Q5VWM3 479 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 PDCD6IPQ8WUM4 868 aaKnown RBP10.95□□□□□ -0.66
NUP188-201ENST00000372577 FAM49BQ9NUQ9 324 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 AKAP12Q02952 1782 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 CASZ1Q86V15 1759 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 TMEM120BA0PK00 339 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 DPYSL4O14531 572 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 TBC1D12O60347 775 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 BCAT1P54687 386 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 SLC29A2Q14542 456 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 TFB1MQ8WVM0 346 aaKnown RBP10.95□□□□□ -0.66
NUP188-201ENST00000372577 SEC16BQ96JE7 1060 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 SPATC1LQ9H0A9 340 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 FAF1Q9UNN5 650 aaPredicted RBP10.95□□□□□ -0.66
NUP188-201ENST00000372577 A0A087X0B3 334 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 ABCE1P61221 599 aaKnown RBP10.95□□□□□ -0.66
NUP188-201ENST00000372577 PTGISQ16647 500 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 TTC23LQ6PF05 361 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 SV2AQ7L0J3 742 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 EIF1ADQ8N9N8 165 aaKnown RBP10.95□□□□□ -0.66
NUP188-201ENST00000372577 MTMR12Q9C0I1 747 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 KLC4Q9NSK0 619 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 DSEQ9UL01 958 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 ANXA9O76027 345 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 CYP2B6P20813 491 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 FCGRTP55899 365 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 DDR1Q08345 913 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 ANO5Q75V66 913 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 PRUNE1Q86TP1 453 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 ABRAQ8N0Z2 381 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 SLC7A14Q8TBB6 771 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 UBA3Q8TBC4 463 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 RMDN1Q96DB5 314 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 FAM161BQ96MY7 647 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 CNPY3Q9BT09 278 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.95□□□□□ -0.66
NUP188-201ENST00000372577 CHMP2BQ9UQN3 213 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 ZMYM2Q9UBW7 1377 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 CACNA1FO60840 1977 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 DCAF6Q58WW2 860 aa10.95□□□□□ -0.66
NUP188-201ENST00000372577 TMTC4Q5T4D3 741 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms