RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 SMARCAD1Q9H4L7 1026 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 HAO1Q9UJM8 370 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 ZNF197O14709 1029 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 ABCE1P61221 599 aaKnown RBP24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 EZH2Q15910 746 aaKnown RBP24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 ZRANB3Q5FWF4 1079 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 PRR5LQ6MZQ0 368 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 SH3TC2Q8TF17 1288 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 L3MBTL3Q96JM7 780 aaPredicted RBP24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 SLC7A5P2Q9GIP4 190 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 WDR35Q9P2L0 1181 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 TARBP1Q13395 1621 aaKnown RBP24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 CAMTA2O94983 1202 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 CCND1P24385 295 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 KCNJ6P48051 423 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 HIST1H2AGP0C0S8 130 aaPredicted RBP24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 HIST1H2ADP20671 130 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 GRB10Q13322 594 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 MGAT5BQ3V5L5 792 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 NYAP1Q6ZVC0 841 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 ZNF280CQ8ND82 737 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 SNRNP27Q8WVK2 155 aaKnown RBP24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 ZNF669Q96BR6 464 aaPredicted RBP24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 FAM136AQ96C01 138 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 HIST1H2AHQ96KK5 128 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 HIST1H2AJQ99878 128 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 H2AFJQ9BTM1 129 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 PCDHB2Q9Y5E7 798 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 NBPF20Q3BBV1 942 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 SLC30A9Q6PML9 568 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 PPIL6Q8IXY8 311 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 HS6ST3Q8IZP7 471 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 ATP11BQ9Y2G3 1177 aa24.96■■□□□ 1.59
RAPGEF1-203ENST00000372195 EDRF1Q3B7T1 1238 aa24.95■■□□□ 1.59
RAPGEF1-203ENST00000372195 ZNF34Q8IZ26 560 aa24.95■■□□□ 1.59
RAPGEF1-203ENST00000372195 SEPT1Q8WYJ6 367 aa24.95■■□□□ 1.59
RAPGEF1-203ENST00000372195 LRRIQ3A6PVS8 624 aaPredicted RBP24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 EIF3DO15371 548 aaKnown RBP eCLIP24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 TAL1P17542 331 aaPredicted RBP24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 SERPINB3P29508 390 aa24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 RAD51Q06609 339 aa24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 NCF1BA6NI72 391 aaPredicted RBP24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 NCF1CA8MVU1 366 aaPredicted RBP24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 TRIM49D1C9J1S8 452 aa24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 RBP3P10745 1247 aa24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 NCF1P14598 390 aaPredicted RBP24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 H0Y626 953 aa24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 TRIM16O95361 564 aa24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 SPRP35270 261 aaPredicted RBP24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 FXR2P51116 673 aaKnown RBP eCLIP24.95■■□□□ 1.581e-6■■■■□ 26.2
RAPGEF1-203ENST00000372195 TSPAN17Q96FV3 270 aa24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 PHTF1Q9UMS5 762 aa24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 ACAD10Q6JQN1 1059 aa24.95■■□□□ 1.58
RAPGEF1-203ENST00000372195 WDR47O94967 919 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 NUDT2P50583 147 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 RINLQ6ZS11 566 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 C6orf222P0C671 652 aaPredicted RBP24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 SOAT1P35610 550 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 TRADDQ15628 312 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 TEX9Q8N6V9 391 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 ENGASEQ8NFI3 743 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 NOD2Q9HC29 1040 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 MED24O75448 989 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 HPDLQ96IR7 371 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 MAP3K14Q99558 947 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 TEX13BQ9BXU2 312 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 GPATCH2LQ9NWQ4 482 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 MSH4O15457 936 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 SKAP2O75563 359 aaPredicted RBP24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 KLHL2O95198 593 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 ADRA2BP18089 450 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 CCDC81Q6ZN84 652 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 CAPN6Q9Y6Q1 641 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 MYO3AQ8NEV4 1616 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 A0A087X0T9 212 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 CSF1RP07333 972 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 FAM228BP0C875 321 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 HERVK_113P62684 666 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 STRIP1Q5VSL9 837 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 ARID3BQ8IVW6 561 aaPredicted RBP24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 TBX20Q9UMR3 447 aa24.94■■□□□ 1.58
RAPGEF1-203ENST00000372195 CDC42BPAQ5VT25 1732 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 FOXN3O00409 490 aaPredicted RBP24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 TNPO2O14787 897 aaKnown RBP24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 TPST1O60507 370 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 APOA1P02647 267 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 PTPN7P35236 360 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 SF3B3Q15393 1217 aaKnown RBP24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 KCNK16Q96T55 309 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 NYAP2Q9P242 653 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 TULP4Q9NRJ4 1543 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 TBX3O15119 743 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 ANGEL2Q5VTE6 544 aaKnown RBP24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 PTRHD1Q6GMV3 140 aaKnown RBP24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 RSAD1Q9HA92 442 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 RHBDL2Q9NX52 303 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 CHRM3P20309 590 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 CENPCQ03188 943 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 MIER2Q8N344 545 aa24.93■■□□□ 1.58
RAPGEF1-203ENST00000372195 CMTM5Q96DZ9 223 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms