RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 FAXDC2Q96IV6 333 aa17.04■□□□□ 0.32
PFDN4-201ENST00000371419 ACBD6Q9BR61 282 aa17.04■□□□□ 0.32
PFDN4-201ENST00000371419 MRPL45Q9BRJ2 306 aaKnown RBP17.04■□□□□ 0.32
PFDN4-201ENST00000371419 NIF3L1Q9GZT8 377 aa17.04■□□□□ 0.32
PFDN4-201ENST00000371419 SNX25Q9H3E2 840 aa17.04■□□□□ 0.32
PFDN4-201ENST00000371419 DZANK1Q9NVP4 752 aa17.04■□□□□ 0.32
PFDN4-201ENST00000371419 BARX2Q9UMQ3 279 aaPredicted RBP17.04■□□□□ 0.32
PFDN4-201ENST00000371419 ZKSCAN5Q9Y2L8 839 aa17.04■□□□□ 0.32
PFDN4-201ENST00000371419 WDR27A2RRH5 827 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 TBX10O75333 385 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 ABLIM3O94929 683 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 OR4Q2P0C623 313 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 SPATA31D3P0C874 917 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 PCSK1P29120 753 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 GNL1P36915 607 aaPredicted RBP17.03■□□□□ 0.32
PFDN4-201ENST00000371419 ASPAP45381 313 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 CDH8P55286 799 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 TSPY1Q01534 308 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 GPR17Q13304 367 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 VWA3BQ502W6 1294 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 SPATA31D4Q6ZUB0 917 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 KREMEN2Q8NCW0 462 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 ANKRD20A12PQ8NF67 263 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 OR6B3Q8NGW1 331 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 BCO2Q9BYV7 579 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 ZCWPW1Q9H0M4 648 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 NDST4Q9H3R1 872 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 PLEKHA4Q9H4M7 779 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 CYP3A43Q9HB55 503 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 MAN1C1Q9NR34 630 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 CLEC1BQ9P126 229 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 FBXW11Q9UKB1 542 aa17.03■□□□□ 0.32
PFDN4-201ENST00000371419 PLXNA3P51805 1871 aa17.02■□□□□ 0.32
PFDN4-201ENST00000371419 ZNF18P17022 549 aa17.02■□□□□ 0.32
PFDN4-201ENST00000371419 HOXB8P17481 243 aaPredicted RBP17.02■□□□□ 0.32
PFDN4-201ENST00000371419 CDK11BP21127 795 aaKnown RBP17.02■□□□□ 0.32
PFDN4-201ENST00000371419 KCNA5P22460 613 aa17.02■□□□□ 0.32
PFDN4-201ENST00000371419 RAP1GAPP47736 663 aa17.02■□□□□ 0.32
PFDN4-201ENST00000371419 DLX2Q07687 328 aaPredicted RBP17.02■□□□□ 0.32
PFDN4-201ENST00000371419 ANKRD54Q6NXT1 300 aa17.02■□□□□ 0.32
PFDN4-201ENST00000371419 DCP1BQ8IZD4 617 aaKnown RBP17.02■□□□□ 0.32
PFDN4-201ENST00000371419 EHBP1Q8NDI1 1231 aa17.02■□□□□ 0.32
PFDN4-201ENST00000371419 TMEM209Q96SK2 561 aa17.02■□□□□ 0.32
PFDN4-201ENST00000371419 SDCBP2Q9H190 292 aa17.02■□□□□ 0.32
PFDN4-201ENST00000371419 AFF4Q9UHB7 1163 aaKnown RBP17.02■□□□□ 0.32
PFDN4-201ENST00000371419 MAFFQ9ULX9 164 aa17.02■□□□□ 0.32
PFDN4-201ENST00000371419 SPTBN5Q9NRC6 3674 aaKnown RBP17.02■□□□□ 0.32
PFDN4-201ENST00000371419 GTPBP10A4D1E9 387 aaKnown RBP17.01■□□□□ 0.31
PFDN4-201ENST00000371419 SPDYE4A6NLX3 237 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 TPM2P07951 284 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 PDGFRBP09619 1106 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 WEE2P0C1S8 567 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 ATF2P15336 505 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 ACAT1P24752 427 aaKnown RBP17.01■□□□□ 0.31
PFDN4-201ENST00000371419 LMO2P25791 158 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 CLCN1P35523 988 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 SMARCB1Q12824 385 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 KRT31Q15323 416 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 MIIPQ5JXC2 388 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 LIN9Q5TKA1 542 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 RNF19BQ6ZMZ0 732 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 DRC7Q8IY82 874 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 LMO3Q8TAP4 145 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 TATDN2Q93075 761 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 MSLNLQ96KJ4 702 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 NT5C1BQ96P26 610 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 HSD3B7Q9H2F3 369 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 PRDM6Q9NQX0 595 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 TAB2Q9NYJ8 693 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 GCNT4Q9P109 453 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 CDH9Q9ULB4 789 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 XIRP2A4UGR9 3374 aa17.01■□□□□ 0.31
PFDN4-201ENST00000371419 A8MXQ7 604 aa17■□□□□ 0.31
PFDN4-201ENST00000371419 H3BQ06 376 aaPredicted RBP17■□□□□ 0.31
PFDN4-201ENST00000371419 PES1O00541 588 aaKnown RBP17■□□□□ 0.31
PFDN4-201ENST00000371419 HCRTO43612 131 aa17■□□□□ 0.31
PFDN4-201ENST00000371419 ELF1P32519 619 aa17■□□□□ 0.31
PFDN4-201ENST00000371419 ADCY1Q08828 1119 aa17■□□□□ 0.31
PFDN4-201ENST00000371419 LRMPQ12912 555 aa17■□□□□ 0.31
PFDN4-201ENST00000371419 SLC39A12Q504Y0 691 aa17■□□□□ 0.31
PFDN4-201ENST00000371419 INTS6LQ5JSJ4 861 aaKnown RBP17■□□□□ 0.31
PFDN4-201ENST00000371419 GBP6Q6ZN66 633 aa17■□□□□ 0.31
PFDN4-201ENST00000371419 CCDC149Q6ZUS6 474 aa17■□□□□ 0.31
PFDN4-201ENST00000371419 RTL10Q7L3V2 364 aa17■□□□□ 0.31
PFDN4-201ENST00000371419 LRRTM3Q86VH5 581 aa17■□□□□ 0.31
PFDN4-201ENST00000371419 PGLYRP2Q96PD5 576 aa17■□□□□ 0.31
PFDN4-201ENST00000371419 SYT15Q9BQS2 421 aa17■□□□□ 0.31
PFDN4-201ENST00000371419 CRACR2AQ9BSW2 395 aa17■□□□□ 0.31
PFDN4-201ENST00000371419 INTS2Q9H0H0 1204 aaKnown RBP17■□□□□ 0.31
PFDN4-201ENST00000371419 SFXN1Q9H9B4 322 aa17■□□□□ 0.31
PFDN4-201ENST00000371419 RRAGDQ9NQL2 400 aaPredicted RBP17■□□□□ 0.31
PFDN4-201ENST00000371419 LIMA1Q9UHB6 759 aaKnown RBP17■□□□□ 0.31
PFDN4-201ENST00000371419 MTMR11A4FU01 709 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 PRRG1O14668 218 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 TBXAS1P24557 533 aaPredicted RBP16.99■□□□□ 0.31
PFDN4-201ENST00000371419 INCA1Q0VD86 236 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 CUL2Q13617 745 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 NFE2Q16621 373 aaPredicted RBP16.99■□□□□ 0.31
PFDN4-201ENST00000371419 EXOC3L4Q17RC7 722 aa16.99■□□□□ 0.31
PFDN4-201ENST00000371419 SYCE2Q6PIF2 218 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms