RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 TICRRQ7Z2Z1 1910 aa11.84□□□□□ -0.51
EXOSC1-202ENST00000370885 A0A1B0GVL5 298 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 ZNF197O14709 1029 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 EIF3DO15371 548 aaKnown RBP eCLIP11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 LDHAP00338 332 aaKnown RBP11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 CST3P01034 146 aaPredicted RBP11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 HAPLN1P10915 354 aaPredicted RBP11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 PAX3P23760 479 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 MLF2Q15773 248 aaPredicted RBP11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 SOWAHAQ2M3V2 549 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 SV2CQ496J9 727 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 CYP4A22Q5TCH4 519 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 SDHAF4Q5VUM1 108 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 IQCEQ6IPM2 695 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 FRMD5Q7Z6J6 570 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 TMEM150AQ86TG1 271 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 PJA1Q8NG27 643 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 GIPC2Q8TF65 315 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 SMARCD2Q92925 531 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 PSMG2Q969U7 264 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 PAGE5Q96GU1 130 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 TRPV4Q9HBA0 871 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 HEBP1Q9NRV9 189 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 GDAP2Q9NXN4 497 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 HPSEQ9Y251 543 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 SIT1Q9Y3P8 196 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 MIA3Q5JRA6 1907 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 DENND4CQ5VZ89 1909 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 F5P12259 2224 aa11.83□□□□□ -0.52
EXOSC1-202ENST00000370885 ZNF292O60281 2723 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 RIF1Q5UIP0 2472 aaKnown RBP11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 KANSL1LA0AUZ9 987 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 ZNF233A6NK53 670 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 PROB1E7EW31 1015 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 ARNTLO00327 626 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 ATP2C2O75185 946 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 PFKFB1P16118 471 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 HMGA1P17096 107 aaKnown RBP11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 LMO2P25791 158 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 TARSP26639 723 aaKnown RBP11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 NBL1P41271 181 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 EPHB3P54753 998 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 CYP4F8P98187 520 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 AMPD3Q01432 767 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 BFSP1Q12934 665 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 STK4Q13043 487 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 BMT2Q1RMZ1 405 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 WDR44Q5JSH3 913 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 ATL3Q6DD88 541 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 ELMOD1Q8N336 334 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 LRRC52Q8N7C0 313 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 KIAA0895Q8NCT3 520 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 KBTBD7Q8WVZ9 684 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 ELMO3Q96BJ8 720 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 SEPT5Q99719 369 aaPredicted RBP11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 PI4K2AQ9BTU6 479 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 ZFP14Q9HCL3 533 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 LTB4R2Q9NPC1 389 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 HSFX1Q9UBD0 423 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 ITGA11Q9UKX5 1188 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 DSEQ9UL01 958 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 SNX9Q9Y5X1 595 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 OBSL1O75147 1896 aa11.82□□□□□ -0.52
EXOSC1-202ENST00000370885 DMXL1Q9Y485 3027 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 PATJQ8NI35 1801 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 PVALEFA0A1B0GWK0 134 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 MYBPHLA2RUH7 354 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 FAM170BA6NMN3 283 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 HEPACAM2A8MVW5 462 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 GABRDO14764 452 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 PRAMEF12O95522 483 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 KRT19P08727 400 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 SLFN14P0C7P3 912 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 CYP2F1P24903 491 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 GABRR2P28476 465 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 GDI1P31150 447 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 PNPLA4P41247 253 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 ALDH1A3P47895 512 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 CASP4P49662 377 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 CYP2J2P51589 502 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 RBP5P82980 135 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 SNRNP35Q16560 246 aaKnown RBP11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 MGAT5BQ3V5L5 792 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 TPRG1Q6ZUI0 275 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 TRAPPC11Q7Z392 1133 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 METTL23Q86XA0 190 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 RIN3Q8TB24 985 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 CACTINQ8WUQ7 758 aaKnown RBP11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 ZNF560Q96MR9 790 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 LRRC27Q9C0I9 530 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 SMG9Q9H0W8 520 aaKnown RBP11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 ATXN3LQ9H3M9 355 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 GOLPH3LQ9H4A5 285 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 DDX43Q9NXZ2 648 aaKnown RBP11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 ABI2Q9NYB9 513 aaPredicted RBP11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 FAM13BQ9NYF5 915 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 GTF3C4Q9UKN8 822 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 CFAP45Q9UL16 551 aa11.81□□□□□ -0.52
EXOSC1-202ENST00000370885 NUP210Q8TEM1 1887 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms