RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 SHC4Q6S5L8 630 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 FAM196AQ6ZSG2 479 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 LRRC34Q8IZ02 419 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 OLFM1Q99784 485 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 FEM1BQ9UK73 627 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 PHTF1Q9UMS5 762 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 AGAP1Q9UPQ3 857 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 PRR23AA6NEV1 266 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 CYBBP04839 570 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 POLBP06746 335 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 SNRPAP09012 282 aaKnown RBP11.56□□□□□ -0.56
COL11A1-203ENST00000370096 PDHBP11177 359 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 SPRP35270 261 aaPredicted RBP11.56□□□□□ -0.56
COL11A1-203ENST00000370096 FAXCQ5TGI0 409 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 C16orf62Q7Z3J2 963 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 ARID3BQ8IVW6 561 aaPredicted RBP11.56□□□□□ -0.56
COL11A1-203ENST00000370096 SLC7A14Q8TBB6 771 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 SPATA16Q9BXB7 569 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 GPR63Q9BZJ6 419 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 LY9Q9HBG7 655 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 CYLDQ9NQC7 956 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 PSMD3O43242 534 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 MFN2O95140 757 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 SLC29A2Q14542 456 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 VEPH1Q14D04 833 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 RBBP8Q99708 897 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 TRIM62Q9BVG3 475 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 PDP2Q9P2J9 529 aa11.56□□□□□ -0.56
COL11A1-203ENST00000370096 PIN4Q9Y237 131 aaKnown RBP11.56□□□□□ -0.56
COL11A1-203ENST00000370096 CYP19A1P11511 503 aaPredicted RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 RRM2P31350 389 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 YWHABP31946 246 aaKnown RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 IFNLR1Q8IU57 520 aaPredicted RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 MAGEB10Q96LZ2 347 aaPredicted RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 SERHL2Q9H4I8 314 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 SERHLQ9NQF3 203 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 GRID1Q9ULK0 1009 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 NQO1P15559 274 aaKnown RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 PBLDP30039 288 aaPredicted RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 TRAF2Q12933 501 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 NCF4Q15080 339 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 FRMD5Q7Z6J6 570 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 RNF149Q8NC42 400 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 LRRC39Q96DD0 335 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 DDX18Q9NVP1 670 aaKnown RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 WWOXQ9NZC7 414 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 CDY2AQ9Y6F7 541 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 CDY1Q9Y6F8 540 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 PVALEFA0A1B0GWK0 134 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 ZNF862O60290 1169 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 CRKP46108 304 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 ST8SIA6P61647 398 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 PRKCQQ04759 706 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 PTGISQ16647 500 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 SEPT5Q99719 369 aaPredicted RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 TBC1D22BQ9NU19 505 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 SRP68Q9UHB9 627 aaKnown RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 RNF112Q9ULX5 631 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 NR5A2O00482 541 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 ASNA1O43681 348 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 ALOX15P16050 662 aaPredicted RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 PTPN12Q05209 780 aaKnown RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 PDZK1Q5T2W1 519 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 TDRD3Q9H7E2 651 aaKnown RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 CYP4F12Q9HCS2 524 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 METTL5Q9NRN9 209 aaKnown RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 RIC8BQ9NVN3 520 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 MAP3K20Q9NYL2 800 aaKnown RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 SNX9Q9Y5X1 595 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 LAMC3Q9Y6N6 1575 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 GLRBP48167 497 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 IRAK1P51617 712 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 ARF5P84085 180 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 KPNB1Q14974 876 aaKnown RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 JAMLQ86YT9 394 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 EPS8L3Q8TE67 593 aaKnown RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 TMEM143Q96AN5 459 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 DDX50Q9BQ39 737 aaKnown RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 TMEM79Q9BSE2 394 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 SASH1O94885 1247 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 ACADSP16219 412 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 PSMB9P28065 219 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 SYTL1Q8IYJ3 562 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 WDR36Q8NI36 951 aaKnown RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 DDI1Q8WTU0 396 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 SGSM3Q96HU1 749 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 KIFC1Q9BW19 673 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 KLHL4Q9C0H6 718 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 PTPRHQ9HD43 1115 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 AVENQ9NQS1 362 aaPredicted RBP11.55□□□□□ -0.56
COL11A1-203ENST00000370096 DCDC2Q9UHG0 476 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 PCDHB8Q9UN66 801 aa11.55□□□□□ -0.56
COL11A1-203ENST00000370096 LRRIQ3A6PVS8 624 aaPredicted RBP11.54□□□□□ -0.56
COL11A1-203ENST00000370096 MAP3K6O95382 1288 aa11.54□□□□□ -0.56
COL11A1-203ENST00000370096 ENOSF1Q7L5Y1 443 aa11.54□□□□□ -0.56
COL11A1-203ENST00000370096 SCUBE1Q8IWY4 988 aa11.54□□□□□ -0.56
COL11A1-203ENST00000370096 USP13Q92995 863 aaPredicted RBP11.54□□□□□ -0.56
COL11A1-203ENST00000370096 UPP2O95045 317 aa11.54□□□□□ -0.56
COL11A1-203ENST00000370096 HSPA13P48723 471 aa11.54□□□□□ -0.56
COL11A1-203ENST00000370096 GEMIN4P57678 1058 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms