RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 ZFYVE26Q68DK2 2539 aa16.71■□□□□ 0.27
SSR4-204ENST00000370087 TNRC6BQ9UPQ9 1833 aaKnown RBP16.7■□□□□ 0.26
SSR4-204ENST00000370087 ATRXP46100 2492 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 C4orf47A7E2U8 309 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 TRDMT1O14717 391 aaKnown RBP16.7■□□□□ 0.26
SSR4-204ENST00000370087 CLDN3O15551 220 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 FGF19O95750 216 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 CLTAP09496 248 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 CYP3A5P20815 502 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 TOB1P50616 345 aaPredicted RBP16.7■□□□□ 0.26
SSR4-204ENST00000370087 LILRA4P59901 499 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 ANAPC15P60006 121 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 ZNF252P-AS1Q0IIN9 211 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 GRSF1Q12849 480 aaKnown RBP eCLIP16.7■□□□□ 0.26
SSR4-204ENST00000370087 MGAT5BQ3V5L5 792 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 ITIH5Q86UX2 942 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 CMTM8Q8IZV2 173 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 SPIRE2Q8WWL2 714 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 USP13Q92995 863 aaPredicted RBP16.7■□□□□ 0.26
SSR4-204ENST00000370087 C8orf76Q96K31 380 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 ZCWPW1Q9H0M4 648 aa16.7■□□□□ 0.26
SSR4-204ENST00000370087 FOXP1Q9H334 677 aaPredicted RBP16.7■□□□□ 0.26
SSR4-204ENST00000370087 HELZP42694 1942 aaKnown RBP16.7■□□□□ 0.26
SSR4-204ENST00000370087 THADAQ6YHU6 1953 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 NPHP3-ACAD11A0A0J9YXS1 232 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 LNP1A1A4G5 178 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 ODC1P11926 461 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 PLS3P13797 630 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 GUCY2CP25092 1073 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 CDC25CP30307 473 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 MATR3P43243 847 aaKnown RBP eCLIP16.69■□□□□ 0.26
SSR4-204ENST00000370087 CREB5Q02930 508 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 PPP2R3AQ06190 1150 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 PDIA5Q14554 519 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 LRRTM3Q86VH5 581 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 KDF1Q8NAX2 398 aaPredicted RBP16.69■□□□□ 0.26
SSR4-204ENST00000370087 C17orf75Q9HAS0 396 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 THG1LQ9NWX6 298 aaKnown RBP16.69■□□□□ 0.26
SSR4-204ENST00000370087 INVSQ9Y283 1065 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 PCDHB6Q9Y5E3 794 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 ABCA7Q8IZY2 2146 aa16.69■□□□□ 0.26
SSR4-204ENST00000370087 ANAPC1Q9H1A4 1944 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 BCLAF3A2AJT9 711 aaKnown RBP16.68■□□□□ 0.26
SSR4-204ENST00000370087 ANTXRLA6NF34 631 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 ATG13O75143 517 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 NFICP08651 508 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 HMGA1P17096 107 aaKnown RBP16.68■□□□□ 0.26
SSR4-204ENST00000370087 GPR15P49685 360 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 GALK1P51570 392 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 SH3PXD2AQ5TCZ1 1133 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 SPATA1Q5VX52 437 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 C9orf57Q5W0N0 161 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 JADE1Q6IE81 842 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 ARMCX5Q6P1M9 558 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 CAMKK1Q8N5S9 505 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 MAB21L3Q8N8X9 362 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 RPLP0P6Q8NHW5 317 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 PNMA5Q96PV4 448 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 HSFX1Q9UBD0 423 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 NBEAQ8NFP9 2946 aa16.68■□□□□ 0.26
SSR4-204ENST00000370087 PATE3B3GLJ2 98 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 TADA3O75528 432 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 CAVIN2O95810 425 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 CYP11A1P05108 521 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 ADRB2P07550 413 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 NLRP12P59046 1061 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 VEPH1Q14D04 833 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 KRT79Q5XKE5 535 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 TXNDC8Q6A555 127 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 CCDC83Q8IWF9 413 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 GATA6Q92908 595 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 BICD1Q96G01 975 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 GCNAQ96QF7 691 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 ADAM33Q9BZ11 813 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 TBX20Q9UMR3 447 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 DMXL2Q8TDJ6 3036 aa16.67■□□□□ 0.26
SSR4-204ENST00000370087 PIRO00625 290 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 F11P03951 625 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 HAPLN1P10915 354 aaPredicted RBP16.66■□□□□ 0.26
SSR4-204ENST00000370087 GJA4P35212 333 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 TRAPPC10P48553 1259 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 TUFMP49411 452 aaKnown RBP16.66■□□□□ 0.26
SSR4-204ENST00000370087 NEK4P51957 841 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 SLC12A3P55017 1021 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 NCKAP1LP55160 1127 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 DMC1Q14565 340 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 ZRSR1Q15695 479 aaKnown RBP16.66■□□□□ 0.26
SSR4-204ENST00000370087 SDHAF4Q5VUM1 108 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 SLC39A4Q6P5W5 647 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 FBXO18Q8NFZ0 1043 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 FAM212AQ96EL1 285 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 PLIN2Q99541 437 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 P2RY13Q9BPV8 354 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 TIPINQ9BVW5 301 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 TMLHEQ9NVH6 421 aa16.66■□□□□ 0.26
SSR4-204ENST00000370087 ABI2Q9NYB9 513 aaPredicted RBP16.66■□□□□ 0.26
SSR4-204ENST00000370087 PKD1L2Q7Z442 2459 aa16.65■□□□□ 0.26
SSR4-204ENST00000370087 ANO9A1A5B4 782 aa16.65■□□□□ 0.26
SSR4-204ENST00000370087 CDX4O14627 284 aaPredicted RBP16.65■□□□□ 0.26
SSR4-204ENST00000370087 OGTO15294 1046 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms