RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 ARHGEF26Q96DR7 871 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 TMEM176AQ96HP8 235 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 TINF2Q9BSI4 451 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 DMAC2Q9NW81 257 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 ZNF112Q9UJU3 913 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 MID2Q9UJV3 735 aa5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 CPSF3Q9UKF6 684 aaKnown RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 TPX2Q9ULW0 747 aaKnown RBP5.59□□□□□ -1.51
SMNDC1-202ENST00000369603 CACNA1SQ13698 1873 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 GMNCA6NCL1 334 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 GLTPD2A6NH11 291 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 CIB2O75838 187 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 ZNF286BP0CG31 522 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 LCP1P13796 627 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 GCKP35557 465 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 IRAK1P51617 712 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 AMPD2Q01433 879 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 PLCB4Q15147 1175 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 GOLGA7BQ2TAP0 167 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 SPOPLQ6IQ16 392 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 GBP7Q8N8V2 638 aaPredicted RBP5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 ARHGEF2Q92974 986 aaKnown RBP5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 MCUR1Q96AQ8 359 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 ZIM3Q96PE6 472 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 RAB3IPQ96QF0 476 aaPredicted RBP5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 NTPCRQ9BSD7 190 aaKnown RBP5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 TACO1Q9BSH4 297 aaKnown RBP5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 CELF4Q9BZC1 486 aaKnown RBP5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 WHRNQ9P202 907 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 KLHL8Q9P2G9 620 aaPredicted RBP5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 ARHGAP28Q9P2N2 729 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 CPA4Q9UI42 421 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 BARX2Q9UMQ3 279 aaPredicted RBP5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 PCDHA3Q9Y5H8 950 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 MAFBQ9Y5Q3 323 aaPredicted RBP5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 SNCAIPQ9Y6H5 919 aa5.59□□□□□ -1.52
SMNDC1-202ENST00000369603 COL1A2P08123 1366 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 A0A0G2JLL6 359 aaPredicted RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 UNCXA6NJT0 531 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 TULP2O00295 520 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 GIPC1O14908 333 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 CST8O60676 142 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 SPAG6O75602 509 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 NOL4O94818 638 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 STIP1P31948 543 aaKnown RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 ARL1P40616 181 aaPredicted RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 RGS7P49802 495 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 KPNA2P52292 529 aaKnown RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 JAG1P78504 1218 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 ASPHQ12797 758 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 ZNF268Q14587 947 aaPredicted RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 MAPRE1Q15691 268 aaKnown RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 CCNG2Q16589 344 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 P3H1Q32P28 736 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 TFDP3Q5H9I0 405 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 HGSNATQ68CP4 663 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 PRRT2Q7Z6L0 340 aaPredicted RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 RNF180Q86T96 592 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 ZBED8Q8IZ13 594 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 PCSK9Q8NBP7 692 aaKnown RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 NLGN2Q8NFZ4 835 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 STMN2Q93045 179 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 ZBTB45Q96K62 511 aaPredicted RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 RBM15Q96T37 977 aaKnown RBP eCLIP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 EPAS1Q99814 870 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 PDGFDQ9GZP0 370 aaPredicted RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 PABPC3Q9H361 631 aaKnown RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 DHX33Q9H6R0 707 aaKnown RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 ACTR5Q9H9F9 607 aaPredicted RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 METTL5Q9NRN9 209 aaKnown RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 PCDHA2Q9Y5H9 948 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 NRCAMQ92823 1304 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 LAMA4Q16363 1823 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 RCCD1A6NED2 376 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 AP3B1O00203 1094 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 PMM2O15305 246 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 PPP1R37O75864 691 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 PDGFRBP09619 1106 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 AKR1A1P14550 325 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 BRAFP15056 766 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 MX2P20592 715 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 BCAT1P54687 386 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 ACTN3Q08043 901 aaPredicted RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 ACAP1Q15027 740 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 PDK2Q15119 407 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 GLB1LQ6UWU2 654 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 TLK2Q86UE8 772 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 SCN4BQ8IWT1 228 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 RIBC1Q8N443 379 aaPredicted RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 MSL3Q8N5Y2 521 aaKnown RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 CFAP36Q96G28 342 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 CLMNQ96JQ2 1002 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 RILPQ96NA2 401 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 ACO2Q99798 780 aaKnown RBP5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 CNPY3Q9BT09 278 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 CXorf56Q9H5V9 222 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 FAM49BQ9NUQ9 324 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 SETD4Q9NVD3 440 aa5.58□□□□□ -1.52
SMNDC1-202ENST00000369603 PAK5Q9P286 719 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms