RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 A6NHS1 94 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 E7ENQ6 273 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 EDF1O60869 148 aaKnown RBP13.59□□□□□ -0.23
CHD1L-202ENST00000369258 PROSCO94903 275 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 F7P08709 466 aaPredicted RBP13.59□□□□□ -0.23
CHD1L-202ENST00000369258 GPX6P59796 221 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 PSMC5P62195 406 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 IRX4P78413 519 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 DENND1AQ8TEH3 1009 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 IWS1Q96ST2 819 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 TARS2Q9BW92 718 aaKnown RBP13.59□□□□□ -0.23
CHD1L-202ENST00000369258 SMG5Q9UPR3 1016 aaKnown RBP13.59□□□□□ -0.23
CHD1L-202ENST00000369258 NR2E3Q9Y5X4 410 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 RBBP6Q7Z6E9 1792 aaKnown RBP13.59□□□□□ -0.23
CHD1L-202ENST00000369258 LRRIQ4A6NIV6 560 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 CSDE1O75534 798 aaKnown RBP13.59□□□□□ -0.23
CHD1L-202ENST00000369258 LINGO3P0C6S8 592 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 PDK4Q16654 411 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 BBS9Q3SYG4 887 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 MON1BQ7L1V2 547 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 RHPN2Q8IUC4 686 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 RELL1Q8IUW5 271 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 IGDCC3Q8IVU1 814 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 CHURC1Q8WUH1 139 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 CLPTM1LQ96KA5 538 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 RIT2Q99578 217 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 AVENQ9NQS1 362 aaPredicted RBP13.59□□□□□ -0.23
CHD1L-202ENST00000369258 KANSL3Q9P2N6 904 aa13.59□□□□□ -0.23
CHD1L-202ENST00000369258 NEFHP12036 1026 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 GMPRP36959 345 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 TSNAXIP1Q2TAA8 658 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 ANO7Q6IWH7 933 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.58□□□□□ -0.24
CHD1L-202ENST00000369258 CCDC60Q8IWA6 550 aaPredicted RBP13.58□□□□□ -0.24
CHD1L-202ENST00000369258 RHOT1Q8IXI2 618 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 PHC3Q8NDX5 983 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 TCP10LQ8TDR4 215 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 PPP1R12CQ9BZL4 782 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 FOXP3Q9BZS1 431 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 XPNPEP1Q9NQW7 623 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 GINM1Q9NU53 330 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 ARL8BQ9NVJ2 186 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 ZFP69BQ9UJL9 534 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 SLX4Q8IY92 1834 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 KLRG2A4D1S0 409 aaPredicted RBP13.58□□□□□ -0.24
CHD1L-202ENST00000369258 PRPF4O43172 522 aaKnown RBP eCLIP13.58□□□□□ -0.245e-9■■■□□ 16.8
CHD1L-202ENST00000369258 KRT36O76013 467 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 ATP4AP20648 1035 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 GTF2H1P32780 548 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 PTDSS1P48651 473 aaKnown RBP13.58□□□□□ -0.24
CHD1L-202ENST00000369258 CTCFP49711 727 aaPredicted RBP13.58□□□□□ -0.24
CHD1L-202ENST00000369258 BAATQ14032 418 aaPredicted RBP13.58□□□□□ -0.24
CHD1L-202ENST00000369258 PGM5Q15124 567 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 WASHC2DQ5SRD0 308 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 CCDC125Q86Z20 511 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 SLC25A41Q8N5S1 370 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 TTC17Q96AE7 1141 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 AKT1S1Q96B36 256 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 TRIM11Q96F44 468 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 PPP1R16BQ96T49 567 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 EXOC7Q9UPT5 735 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 CHMP2BQ9UQN3 213 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 COQ4Q9Y3A0 265 aa13.58□□□□□ -0.24
CHD1L-202ENST00000369258 MYO18AQ92614 2054 aaKnown RBP13.58□□□□□ -0.24
CHD1L-202ENST00000369258 E5RJQ4 531 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 LIASO43766 372 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 ATP6V1C1P21283 382 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 CETN2P41208 172 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 RAP1GAPP47736 663 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 LIG4P49917 911 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 SEPT7Q16181 437 aaKnown RBP13.57□□□□□ -0.24
CHD1L-202ENST00000369258 NPNTQ6UXI9 565 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 C3orf62Q6ZUJ4 267 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 NLRP9Q7RTR0 991 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 ZC3H18Q86VM9 953 aaKnown RBP13.57□□□□□ -0.24
CHD1L-202ENST00000369258 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.57□□□□□ -0.24
CHD1L-202ENST00000369258 FBXO41Q8TF61 875 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 WDR60Q8WVS4 1066 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 C10orf82Q8WW14 230 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 ZNF75CPQ92670 426 aaPredicted RBP13.57□□□□□ -0.24
CHD1L-202ENST00000369258 TTC25Q96NG3 672 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 PIH1D1Q9NWS0 290 aaKnown RBP13.57□□□□□ -0.24
CHD1L-202ENST00000369258 ZNF70Q9UC06 446 aaPredicted RBP13.57□□□□□ -0.24
CHD1L-202ENST00000369258 CLUHO75153 1309 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 E2F8A0AVK6 867 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 GLRA2P23416 452 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 SERPINB3P29508 390 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 ALDH1B1P30837 517 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 NCKAP1LP55160 1127 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 SNRPFP62306 86 aaKnown RBP13.57□□□□□ -0.24
CHD1L-202ENST00000369258 NOMO3P69849 1222 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 SARNPP82979 210 aaKnown RBP13.57□□□□□ -0.24
CHD1L-202ENST00000369258 MXRA7P84157 204 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 MUM1Q2TAK8 710 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 SH3PXD2AQ5TCZ1 1133 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 LIN9Q5TKA1 542 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 FYB2Q5VWT5 728 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 DCUN1D2Q6PH85 259 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 RGS9BPQ6ZS82 235 aa13.57□□□□□ -0.24
CHD1L-202ENST00000369258 EEPD1Q7L9B9 569 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms