RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 DERAQ9Y315 318 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 HCFC2Q9Y5Z7 792 aa9.44□□□□□ -0.9
SNX27-201ENST00000368838 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.43□□□□□ -0.9
SNX27-201ENST00000368838 C2orf71A6NGG8 1288 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 TISP43B9A030 160 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 EPHB6O15197 1021 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 PJA2O43164 708 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 OFD1O75665 1012 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 CXCL14O95715 111 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 EDN1P05305 212 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 SRGAP2BP0DMP2 458 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 EPCAMP16422 314 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 SLC9A1P19634 815 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 PPM1AP35813 382 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 GCGRP47871 477 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 ALDH7A1P49419 539 aaKnown RBP9.43□□□□□ -0.9
SNX27-201ENST00000368838 AFF1P51825 1210 aaKnown RBP9.43□□□□□ -0.9
SNX27-201ENST00000368838 VCPP55072 806 aaKnown RBP9.43□□□□□ -0.9
SNX27-201ENST00000368838 MYL7Q01449 175 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 RNASELQ05823 741 aaKnown RBP9.43□□□□□ -0.9
SNX27-201ENST00000368838 SMC1AQ14683 1233 aaKnown RBP9.43□□□□□ -0.9
SNX27-201ENST00000368838 XKR4Q5GH76 650 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 DCAF17Q5H9S7 520 aaPredicted RBP9.43□□□□□ -0.9
SNX27-201ENST00000368838 TMCO4Q5TGY1 634 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 SFMBT2Q5VUG0 894 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 TCERG1LQ5VWI1 586 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 PDE12Q6L8Q7 609 aaKnown RBP9.43□□□□□ -0.9
SNX27-201ENST00000368838 ZNF280BQ86YH2 543 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 REXO1L1PQ8IX06 675 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 VPS52Q8N1B4 723 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 MRPL43Q8N983 215 aaKnown RBP9.43□□□□□ -0.9
SNX27-201ENST00000368838 EPS8L1Q8TE68 723 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 LRRN4Q8WUT4 740 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 TMEM169Q96HH4 297 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 CDCA3Q99618 268 aaPredicted RBP9.43□□□□□ -0.9
SNX27-201ENST00000368838 CGRRF1Q99675 332 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 SYT11Q9BT88 431 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 LSM14BQ9BX40 385 aaKnown RBP9.43□□□□□ -0.9
SNX27-201ENST00000368838 IKZF4Q9H2S9 585 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 POMKQ9H5K3 350 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 NRDE2Q9H7Z3 1164 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 MINDY3Q9H8M7 445 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 PRM3Q9NNZ6 103 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 NGRNQ9NPE2 291 aaKnown RBP9.43□□□□□ -0.9
SNX27-201ENST00000368838 CHST12Q9NRB3 414 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 FAM105AQ9NUU6 356 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 FAM86C1Q9NVL1 165 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 RAB20Q9NX57 234 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 ARHGAP20Q9P2F6 1191 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 NENFQ9UMX5 172 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 CNTN6Q9UQ52 1028 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 PPP2R2CQ9Y2T4 447 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 C2CD2Q9Y426 696 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 VWA8A3KMH1 1905 aa9.43□□□□□ -0.9
SNX27-201ENST00000368838 LRRC53A6NM62 1247 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 BTNL10A8MVZ5 291 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 INO80B-WBP1J3KQ70 363 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 TSPAN1O60635 241 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 EOMESO95936 686 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 POMCP01189 267 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 ASGR2P07307 311 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 ARF4P18085 180 aaPredicted RBP9.42□□□□□ -0.9
SNX27-201ENST00000368838 GRM5P41594 1212 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 STAT1P42224 750 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 SLC11A1P49279 550 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 POLR2FP61218 127 aaKnown RBP9.42□□□□□ -0.9
SNX27-201ENST00000368838 DLG4P78352 724 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 BMS1Q14692 1282 aaKnown RBP9.42□□□□□ -0.9
SNX27-201ENST00000368838 TCEAL1Q15170 157 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 GLB1LQ6UWU2 654 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 RAD9BQ6WBX8 426 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 TMEM184AQ6ZMB5 413 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 SUGP1Q8IWZ8 645 aaKnown RBP9.42□□□□□ -0.9
SNX27-201ENST00000368838 SHC3Q92529 594 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 CCDC42Q96M95 316 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 FNBP1Q96RU3 617 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 FAM213AQ9BRX8 229 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 VN1R3Q9BXE9 311 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 MRPL9Q9BYD2 267 aaKnown RBP9.42□□□□□ -0.9
SNX27-201ENST00000368838 INTS2Q9H0H0 1204 aaKnown RBP9.42□□□□□ -0.9
SNX27-201ENST00000368838 CDT1Q9H211 546 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 PCIF1Q9H4Z3 704 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 LUC7LQ9NQ29 371 aaKnown RBP9.42□□□□□ -0.9
SNX27-201ENST00000368838 RRAGDQ9NQL2 400 aaPredicted RBP9.42□□□□□ -0.9
SNX27-201ENST00000368838 RBAKQ9NYW8 714 aaPredicted RBP9.42□□□□□ -0.9
SNX27-201ENST00000368838 INTUQ9ULD6 942 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 PCDHB2Q9Y5E7 798 aa9.42□□□□□ -0.9
SNX27-201ENST00000368838 CACNA1HO95180 2353 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 C2CD4DB7Z1M9 353 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 F8VZ95 297 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 C2CD2LO14523 706 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 DDHD2O94830 711 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 IPO7O95373 1038 aaKnown RBP9.41□□□□□ -0.9
SNX27-201ENST00000368838 FAM163BP0C2L3 166 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 TBXAS1P24557 533 aaPredicted RBP9.41□□□□□ -0.9
SNX27-201ENST00000368838 HOXA11P31270 313 aaPredicted RBP9.41□□□□□ -0.9
SNX27-201ENST00000368838 SOX5P35711 763 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 KLK7P49862 253 aa9.41□□□□□ -0.9
SNX27-201ENST00000368838 ETF1P62495 437 aaKnown RBP9.41□□□□□ -0.9
SNX27-201ENST00000368838 SIGLEC14Q08ET2 396 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms