RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 UNC93AQ86WB7 457 aa20.64■□□□□ 0.89
CHTOP-204ENST00000368694 SYCE1Q8N0S2 351 aa20.64■□□□□ 0.89
CHTOP-204ENST00000368694 PDCL2Q8N4E4 241 aa20.64■□□□□ 0.89
CHTOP-204ENST00000368694 C12orf29Q8N999 325 aa20.64■□□□□ 0.89
CHTOP-204ENST00000368694 LRRC57Q8N9N7 239 aa20.64■□□□□ 0.89
CHTOP-204ENST00000368694 ZNF564Q8TBZ8 553 aaPredicted RBP20.64■□□□□ 0.89
CHTOP-204ENST00000368694 KBTBD7Q8WVZ9 684 aa20.64■□□□□ 0.89
CHTOP-204ENST00000368694 ZNF518BQ9C0D4 1074 aa20.64■□□□□ 0.89
CHTOP-204ENST00000368694 CDC23Q9UJX2 597 aa20.64■□□□□ 0.89
CHTOP-204ENST00000368694 KIAA1257Q9ULG3 409 aa20.64■□□□□ 0.89
CHTOP-204ENST00000368694 M0QYV0 167 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 BUB1BO60566 1050 aaPredicted RBP20.63■□□□□ 0.89
CHTOP-204ENST00000368694 IGFBP6P24592 240 aaPredicted RBP20.63■□□□□ 0.89
CHTOP-204ENST00000368694 GNL1P36915 607 aaPredicted RBP20.63■□□□□ 0.89
CHTOP-204ENST00000368694 AMPD2Q01433 879 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 TUSC3Q13454 348 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 TUBB2AQ13885 445 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 PTPROQ16827 1216 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 CLLU1OSQ5K130 101 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 LIN9Q5TKA1 542 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 DENND1BQ6P3S1 775 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 DEFB128Q7Z7B8 93 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 PHLDB2Q86SQ0 1253 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 PHF13Q86YI8 300 aaPredicted RBP20.63■□□□□ 0.89
CHTOP-204ENST00000368694 TOP6BLQ8N6T0 577 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 C3orf58Q8NDZ4 430 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 URGCPQ8TCY9 931 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 TUBB2BQ9BVA1 445 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 TMEM106CQ9BVX2 250 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 TMEM161AQ9NX61 479 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 PACSIN2Q9UNF0 486 aaPredicted RBP20.63■□□□□ 0.89
CHTOP-204ENST00000368694 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.63■□□□□ 0.89
CHTOP-204ENST00000368694 ENPP3O14638 875 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 SLU7O95391 586 aaKnown RBP20.63■□□□□ 0.89
CHTOP-204ENST00000368694 PARNO95453 639 aaKnown RBP20.63■□□□□ 0.89
CHTOP-204ENST00000368694 PDGFRBP09619 1106 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 RRM1P23921 792 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 DNA2P51530 1060 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 DSTYKQ6XUX3 929 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 PSMB7Q99436 277 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 TMEM39AQ9NV64 488 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 UVRAGQ9P2Y5 699 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 SNX12Q9UMY4 172 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 NME7Q9Y5B8 376 aa20.63■□□□□ 0.89
CHTOP-204ENST00000368694 O00370 1275 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 CTIFO43310 598 aaKnown RBP20.62■□□□□ 0.89
CHTOP-204ENST00000368694 HCRTO43612 131 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 SRGAP2O75044 1071 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 B3GAT3O94766 335 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 MICAL2O94851 1124 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 C1QBPQ07021 282 aaKnown RBP20.62■□□□□ 0.89
CHTOP-204ENST00000368694 CNGA2Q16280 664 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 PAN2Q504Q3 1202 aaKnown RBP20.62■□□□□ 0.89
CHTOP-204ENST00000368694 MEI1Q5TIA1 1274 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 PEX26Q7Z412 305 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 ANKRD7Q92527 254 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 DDX27Q96GQ7 796 aaKnown RBP20.62■□□□□ 0.89
CHTOP-204ENST00000368694 VCPIP1Q96JH7 1222 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 CALR3Q96L12 384 aaKnown RBP20.62■□□□□ 0.89
CHTOP-204ENST00000368694 SENP8Q96LD8 212 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 TLR10Q9BXR5 811 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 DNAI2Q9GZS0 605 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 LHX5Q9H2C1 402 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 DPEP3Q9H4B8 488 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 FAM49BQ9NUQ9 324 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 PCDHB7Q9Y5E2 793 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 KIAA0100Q14667 2235 aaKnown RBP20.62■□□□□ 0.89
CHTOP-204ENST00000368694 INPPL1O15357 1258 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 MMP8P22894 467 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 CDH5P33151 784 aaPredicted RBP20.62■□□□□ 0.89
CHTOP-204ENST00000368694 HADHBP55084 474 aaKnown RBP20.62■□□□□ 0.89
CHTOP-204ENST00000368694 RNASELQ05823 741 aaKnown RBP20.62■□□□□ 0.89
CHTOP-204ENST00000368694 TCEAL1Q15170 157 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 NOMO2Q5JPE7 1267 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 ABI1Q8IZP0 508 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 MNS1Q8NEH6 495 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 UROC1Q96N76 676 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 CARD6Q9BX69 1037 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 AVENQ9NQS1 362 aaPredicted RBP20.62■□□□□ 0.89
CHTOP-204ENST00000368694 TSPAN16Q9UKR8 245 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 TBX21Q9UL17 535 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 LRFN2Q9ULH4 789 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 HYOU1Q9Y4L1 999 aa20.62■□□□□ 0.89
CHTOP-204ENST00000368694 CLTBP09497 229 aa20.61■□□□□ 0.89
CHTOP-204ENST00000368694 LMO2P25791 158 aa20.61■□□□□ 0.89
CHTOP-204ENST00000368694 STILQ15468 1287 aa20.61■□□□□ 0.89
CHTOP-204ENST00000368694 LRRC26Q2I0M4 334 aa20.61■□□□□ 0.89
CHTOP-204ENST00000368694 WSCD1Q658N2 575 aa20.61■□□□□ 0.89
CHTOP-204ENST00000368694 LLGL2Q6P1M3 1020 aa20.61■□□□□ 0.89
CHTOP-204ENST00000368694 LIMS2Q7Z4I7 341 aa20.61■□□□□ 0.89
CHTOP-204ENST00000368694 ERICH1Q86X53 443 aa20.61■□□□□ 0.89
CHTOP-204ENST00000368694 WDTC1Q8N5D0 677 aa20.61■□□□□ 0.89
CHTOP-204ENST00000368694 HASPINQ8TF76 798 aa20.61■□□□□ 0.89
CHTOP-204ENST00000368694 STXBP5LQ9Y2K9 1186 aa20.61■□□□□ 0.89
CHTOP-204ENST00000368694 TMEM110-MUSTN1A8MSY1 372 aa20.6■□□□□ 0.89
CHTOP-204ENST00000368694 CXCL10P02778 98 aa20.6■□□□□ 0.89
CHTOP-204ENST00000368694 CALB1P05937 261 aa20.6■□□□□ 0.89
CHTOP-204ENST00000368694 CBX1P83916 185 aa20.6■□□□□ 0.89
CHTOP-204ENST00000368694 TCTN1Q2MV58 587 aa20.6■□□□□ 0.89
CHTOP-204ENST00000368694 PPP1R26Q5T8A7 1209 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms