RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 PDP2Q9P2J9 529 aa11.32□□□□□ -0.6
EBF3-202ENST00000368648 HESX1Q9UBX0 185 aa11.32□□□□□ -0.6
EBF3-202ENST00000368648 C2orf71A6NGG8 1288 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 HNRNPRO43390 633 aaKnown RBP11.31□□□□□ -0.6
EBF3-202ENST00000368648 PRPSAP2O60256 369 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 RASSF9O75901 435 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 TXNP10599 105 aaKnown RBP11.31□□□□□ -0.6
EBF3-202ENST00000368648 AQP5P55064 265 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 ARPP19P56211 112 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 CDK17Q00537 523 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 ITKQ08881 620 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 XRCC4Q13426 336 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 CEP55Q53EZ4 464 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 ZCCHC23Q6ZST2 131 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 HAUS6Q7Z4H7 955 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 SCUBE1Q8IWY4 988 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 GCNAQ96QF7 691 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 CAMKK2Q96RR4 588 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 EFHD1Q9BUP0 239 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 TMEM120AQ9BXJ8 343 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 IL1RL2Q9HB29 575 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 FBXO6Q9NRD1 293 aaPredicted RBP11.31□□□□□ -0.6
EBF3-202ENST00000368648 ADARB2Q9NS39 739 aaKnown RBP11.31□□□□□ -0.6
EBF3-202ENST00000368648 LRFN2Q9ULH4 789 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 STRIP2Q9ULQ0 834 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 GOLGA8QA0A0J9YX86 632 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 GOLGA8OA6NCC3 632 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 SPDYE5A6NIY4 337 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 GOLGA8NF8WBI6 632 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 ONECUT3O60422 494 aaPredicted RBP11.31□□□□□ -0.6
EBF3-202ENST00000368648 WEE2P0C1S8 567 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 DAB2P98082 770 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 PDIA5Q14554 519 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 PCNX4Q63HM2 1172 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 KAT5Q92993 513 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 DACT3Q96B18 629 aaPredicted RBP11.31□□□□□ -0.6
EBF3-202ENST00000368648 TRIM11Q96F44 468 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 FAM84AQ96KN4 292 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 RTFDC1Q9BY42 306 aaPredicted RBP11.31□□□□□ -0.6
EBF3-202ENST00000368648 GLIS2Q9BZE0 524 aaPredicted RBP11.31□□□□□ -0.6
EBF3-202ENST00000368648 UBXN6Q9BZV1 441 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 C20orf96Q9NUD7 363 aaPredicted RBP11.31□□□□□ -0.6
EBF3-202ENST00000368648 XPO7Q9UIA9 1087 aaKnown RBP11.31□□□□□ -0.6
EBF3-202ENST00000368648 AGAP1Q9UPQ3 857 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 KNDC1Q76NI1 1749 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 USP1O94782 785 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 CLPTM1O96005 669 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 PRELPP51888 382 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 ZBTB41Q5SVQ8 909 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 KRT39Q6A163 491 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 KDELC2Q7Z4H8 507 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 AFAP1L2Q8N4X5 818 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 RBM41Q96IZ5 413 aaKnown RBP11.31□□□□□ -0.6
EBF3-202ENST00000368648 SSX2IPQ9Y2D8 614 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 USP20Q9Y2K6 914 aa11.31□□□□□ -0.6
EBF3-202ENST00000368648 KLRC4O43908 158 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 CST8O60676 142 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 NELFEP18615 380 aaKnown RBP11.3□□□□□ -0.6
EBF3-202ENST00000368648 RRM1P23921 792 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 SCNN1BP51168 640 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 C16orf72Q14CZ0 275 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 SLC47A2Q86VL8 602 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 FAM71DQ8N9W8 422 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 MCEEQ96PE7 176 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 ERVK-5Q9HDB9 667 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 OLFML3Q9NRN5 406 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 TBC1D22BQ9NU19 505 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 ATRNO75882 1429 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 C19orf81C9J6K1 198 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 AGRPO00253 132 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 DYNC1LI2O43237 492 aaPredicted RBP11.3□□□□□ -0.6
EBF3-202ENST00000368648 UNC5CO95185 931 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 PYGLP06737 847 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 C6orf222P0C671 652 aaPredicted RBP11.3□□□□□ -0.6
EBF3-202ENST00000368648 CASP5P51878 434 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 CDH6P55285 790 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 EIF3EP60228 445 aaKnown RBP11.3□□□□□ -0.6
EBF3-202ENST00000368648 SLC34A1Q06495 639 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 ZBTB17Q13105 803 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 ATP1A4Q13733 1029 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 SEZ6Q53EL9 994 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 LRRC8EQ6NSJ5 796 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 EXOC8Q8IYI6 725 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 KIAA2013Q8IYS2 634 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 TCP10LQ8TDR4 215 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 BAP1Q92560 729 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 PIH1D1Q9NWS0 290 aaKnown RBP11.3□□□□□ -0.6
EBF3-202ENST00000368648 MAD2L2Q9UI95 211 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 WNT10BO00744 389 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 BANF1O75531 89 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 GGPS1O95749 300 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 RPA3P35244 121 aaPredicted RBP11.3□□□□□ -0.6
EBF3-202ENST00000368648 GARSP41250 739 aaKnown RBP11.3□□□□□ -0.6
EBF3-202ENST00000368648 ZNF200P98182 395 aaPredicted RBP11.3□□□□□ -0.6
EBF3-202ENST00000368648 KRT76Q01546 638 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 ROR2Q01974 943 aaKnown RBP11.3□□□□□ -0.6
EBF3-202ENST00000368648 KIF19Q2TAC6 998 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 KIAA1841Q6NSI8 718 aa11.3□□□□□ -0.6
EBF3-202ENST00000368648 MSL3Q8N5Y2 521 aaKnown RBP11.3□□□□□ -0.6
EBF3-202ENST00000368648 FBXL13Q8NEE6 735 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms