RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 DCTN4Q9UJW0 460 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 MYH9P35579 1960 aaKnown RBP13□□□□□ -0.33
PTPN7-202ENST00000367279 STAM2O75886 525 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 OATP04181 439 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 CNTN2Q02246 1040 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 C1QBPQ07021 282 aaKnown RBP13□□□□□ -0.33
PTPN7-202ENST00000367279 MKRN3Q13064 507 aaKnown RBP13□□□□□ -0.33
PTPN7-202ENST00000367279 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13□□□□□ -0.33
PTPN7-202ENST00000367279 EMC1Q8N766 993 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 TMEM35BQ8NCS4 154 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 LRRC37BQ96QE4 947 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 LBHD1Q9BQE6 289 aaPredicted RBP13□□□□□ -0.33
PTPN7-202ENST00000367279 LGALS13Q9UHV8 139 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 KIAA1217Q5T5P2 1943 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 PIK3R2O00459 728 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 LDHAP00338 332 aaKnown RBP13□□□□□ -0.33
PTPN7-202ENST00000367279 KRT4P19013 534 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 BACE1P56817 501 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 BASP1P80723 227 aaKnown RBP13□□□□□ -0.33
PTPN7-202ENST00000367279 OVGP1Q12889 678 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 TMEM132BQ14DG7 1078 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 LVRNQ6Q4G3 990 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 PALM2Q8IXS6 379 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 NPHS2Q9NP85 383 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 CISHQ9NSE2 258 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 KAT6AQ92794 2004 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 TMEM191CA6NGB0 347 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 CST8O60676 142 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 CALB1P05937 261 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 TMEM191BP0C7N4 346 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 MMP8P22894 467 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 ALDH3A1P30838 453 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 RAP1GAPP47736 663 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 RNASELQ05823 741 aaKnown RBP12.99□□□□□ -0.33
PTPN7-202ENST00000367279 PTP4A2Q12974 167 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 TFDP1Q14186 410 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 SLC1A5Q15758 541 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 HIF1AQ16665 826 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 ALLCQ8N6M5 410 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 MAML1Q92585 1016 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 HSPH1Q92598 858 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 CDHR1Q96JP9 859 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 GINM1Q9NU53 330 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 NOP53Q9NZM5 478 aaKnown RBP12.99□□□□□ -0.33
PTPN7-202ENST00000367279 TJP2Q9UDY2 1190 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 HACL1Q9UJ83 578 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 H0Y3Z8 333 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 MAFGO15525 162 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 ATP4AP20648 1035 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 CTCFP49711 727 aaPredicted RBP12.99□□□□□ -0.33
PTPN7-202ENST00000367279 HIRAP54198 1017 aaPredicted RBP12.99□□□□□ -0.33
PTPN7-202ENST00000367279 NRLP54845 237 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 OTUD4Q01804 1114 aaKnown RBP12.99□□□□□ -0.33
PTPN7-202ENST00000367279 ZNF252P-AS1Q0IIN9 211 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 TFDP3Q5H9I0 405 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 CEP128Q6ZU80 1094 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 RFX6Q8HWS3 928 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 LRRC71Q8N4P6 559 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 ZNF280CQ8ND82 737 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 TTC25Q96NG3 672 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 CALN1Q9BXU9 219 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 ACAD9Q9H845 621 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 PDLIM7Q9NR12 457 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 CYP39A1Q9NYL5 469 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 PGAP2Q9UHJ9 254 aa12.99□□□□□ -0.33
PTPN7-202ENST00000367279 NAMPTP43490 491 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 VCPP55072 806 aaKnown RBP12.98□□□□□ -0.33
PTPN7-202ENST00000367279 GALNTL6Q49A17 601 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 TMEM130Q8N3G9 435 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 ACTL9Q8TC94 416 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 CCHCR1Q8TD31 782 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 VCPIP1Q96JH7 1222 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 TEPSINQ96N21 525 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 PORCNQ9H237 461 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 COL4A5P29400 1685 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 ZNF268Q14587 947 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-202ENST00000367279 ZNF699Q32M78 642 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 C3orf62Q6ZUJ4 267 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 PPP1R16BQ96T49 567 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 MAK16Q9BXY0 300 aaKnown RBP12.98□□□□□ -0.33
PTPN7-202ENST00000367279 TXLNGQ9NUQ3 528 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 hCG_1818297A0A087WSY0 165 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 A0A0B4J269 797 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 A0A1B0GUA9 196 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 TCEA3O75764 348 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 CBX6O95503 412 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 GCAP28676 217 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 RFC1P35251 1148 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-202ENST00000367279 GDF10P55107 478 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 CAPSQ13938 189 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 STXBP2Q15833 593 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 ANKRD22Q5VYY1 191 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 XRRA1Q6P2D8 792 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 MAGEC3Q8TD91 643 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 PRPF31Q8WWY3 499 aaKnown RBP12.98□□□□□ -0.33
PTPN7-202ENST00000367279 TFAP2BQ92481 460 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 GRAMD1AQ96CP6 724 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 TEX13BQ9BXU2 312 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 PRKAG3Q9UGI9 489 aa12.98□□□□□ -0.33
PTPN7-202ENST00000367279 GRID1Q9ULK0 1009 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms