RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 CSGALNACT2Q8N6G5 542 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 OR5B17Q8NGF7 314 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ZSCAN18Q8TBC5 510 aaPredicted RBP14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SPPL2BQ8TCT7 592 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 CLDN23Q96B33 292 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 RSPRY1Q96DX4 576 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ACBD6Q9BR61 282 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 MTMR12Q9C0I1 747 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 HEBP1Q9NRV9 189 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 AGPAT3Q9NRZ7 376 aa14.72□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ZNF292O60281 2723 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 UBE4BO95155 1302 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ZNF233A6NK53 670 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 KLRC4O43908 158 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 GFRA3O60609 400 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 FGF19O95750 216 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 CD72P21854 359 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ME1P48163 572 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SNRPFP62306 86 aaKnown RBP14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 RBP5P82980 135 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 CUL4BQ13620 913 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 GRM2Q14416 872 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ASCL5Q7RTU5 278 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 FRMD5Q7Z6J6 570 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 ITIH5Q86UX2 942 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 C1orf210Q8IVY1 113 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 C12orf56Q8IXR9 622 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 DCP1BQ8IZD4 617 aaKnown RBP14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 TMEM86AQ8N2M4 240 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 TOP6BLQ8N6T0 577 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SPRYD3Q8NCJ5 442 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 SPATA18Q8TC71 538 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 DEPDC1BQ8WUY9 529 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 LEO1Q8WVC0 666 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 LPIN3Q9BQK8 851 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 TRMT61BQ9BVS5 477 aaKnown RBP14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 GZF1Q9H116 711 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 BLZF1Q9H2G9 400 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 KIAA1586Q9HCI6 787 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 LTB4R2Q9NPC1 389 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 GTF3C3Q9Y5Q9 886 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 MIA3Q5JRA6 1907 aa14.71□□□□□ -0.05
TNFRSF1A-202ENST00000366159 PRR23AA6NEV1 266 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 FAM170BA6NMN3 283 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 HEPACAM2A8MVW5 462 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ACTN4O43707 911 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SLFN14P0C7P3 912 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 HMGA1P17096 107 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 RFX1P22670 979 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CDR1P51861 262 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 MLLT6P55198 1093 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 FCHO2Q0JRZ9 810 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SURF1Q15526 300 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SOWAHAQ2M3V2 549 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 MGAT5BQ3V5L5 792 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 LMBRD2Q68DH5 695 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 DPH6Q7L8W6 267 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TMEM150AQ86TG1 271 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 OSTM1Q86WC4 334 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TMEM174Q8WUU8 243 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 IRF7Q92985 503 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 E2F7Q96AV8 911 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 LRRC3BQ96PB8 259 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 NELL2Q99435 816 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 FAM13BQ9NYF5 915 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 PATJQ8NI35 1801 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 NUP210Q8TEM1 1887 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CACNA1IQ9P0X4 2223 aa14.7□□□□□ -0.06
TNFRSF1A-202ENST00000366159 HUS1O60921 280 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TMEM191BP0C7N4 346 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CMA1P23946 247 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TARSP26639 723 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 GABRR2P28476 465 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 RPS9P46781 194 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SNRNP35Q16560 246 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 DUOXA2Q1HG44 320 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ZNF852Q6ZMS4 543 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TPRG1Q6ZUI0 275 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 WDR49Q8IV35 697 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ARID3BQ8IVW6 561 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 GRAMD1CQ8IYS0 662 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 KBTBD7Q8WVZ9 684 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ANKRD36BP1Q96IX9 119 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SEPT5Q99719 369 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 ATXN3LQ9H3M9 355 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 BRD9Q9H8M2 597 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SLC39A2Q9NP94 309 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 DDX43Q9NXZ2 648 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SERTAD1Q9UHV2 236 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 HPSEQ9Y251 543 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 PCDHB5Q9Y5E4 795 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 SNX9Q9Y5X1 595 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 FANCMQ8IYD8 2048 aa14.69□□□□□ -0.06
TNFRSF1A-202ENST00000366159 DENND4CQ5VZ89 1909 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 TICRRQ7Z2Z1 1910 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 FAM237AA0A1B0GTK4 181 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CLIC2O15247 247 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 CST3P01034 146 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 F11P03951 625 aa14.68□□□□□ -0.06
TNFRSF1A-202ENST00000366159 KRT19P08727 400 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms