RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CHPFQ8IZ52 775 aa5.77□□□□□ -1.49
RNU4-28P-201ENST00000364739 B3GALNT2Q8NCR0 500 aa5.77□□□□□ -1.49
RNU4-28P-201ENST00000364739 BRIX1Q8TDN6 353 aaKnown RBP5.77□□□□□ -1.49
RNU4-28P-201ENST00000364739 AIFM3Q96NN9 605 aa5.77□□□□□ -1.49
RNU4-28P-201ENST00000364739 P2RX7Q99572 595 aaKnown RBP5.77□□□□□ -1.49
RNU4-28P-201ENST00000364739 TPSD1Q9BZJ3 242 aa5.77□□□□□ -1.49
RNU4-28P-201ENST00000364739 AMBRA1Q9C0C7 1298 aa5.77□□□□□ -1.49
RNU4-28P-201ENST00000364739 SARS2Q9NP81 518 aaKnown RBP5.77□□□□□ -1.49
RNU4-28P-201ENST00000364739 ST3GAL5Q9UNP4 418 aa5.77□□□□□ -1.49
RNU4-28P-201ENST00000364739 RAD54BQ9Y620 910 aa5.77□□□□□ -1.49
RNU4-28P-201ENST00000364739 A0A088AWK7 358 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 ADM5C9JUS6 153 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 E7ENX8 843 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 CHEK2O96017 543 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 GCLCP48506 637 aaPredicted RBP5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 ZNF134P52741 427 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 MAPK10P53779 464 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 TAP2Q03519 686 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 GTF2H3Q13889 308 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 PPP2R5AQ15172 486 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 NFE2Q16621 373 aaPredicted RBP5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 RBM20Q5T481 1227 aaKnown RBP5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 STRIP1Q5VSL9 837 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 PEG10Q86TG7 708 aaKnown RBP5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 ARHGEF25Q86VW2 580 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 ZNF575Q86XF7 245 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 PDLIM2Q96JY6 352 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 SLC46A1Q96NT5 459 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 R3HDMLQ9H3Y0 253 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 TLK1Q9UKI8 766 aa5.76□□□□□ -1.49
RNU4-28P-201ENST00000364739 H3BML4 177 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 DCLK1O15075 740 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 PROM1O43490 865 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 CTNND1O60716 968 aaKnown RBP5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 PIM1P11309 404 aaPredicted RBP5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 FGL2Q14314 439 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 LLGL1Q15334 1064 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 ERCC6LQ2NKX8 1250 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 FAM160B1Q5W0V3 765 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 KIAA0895LQ68EN5 471 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 FBXO42Q6P3S6 717 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 TMEM108Q6UXF1 575 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 OVCH2Q7RTZ1 564 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 DAAM2Q86T65 1068 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 CAGE1Q8TC20 777 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 MRGPRX1Q96LB2 322 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 CAMKK2Q96RR4 588 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 ACTRT3Q9BYD9 372 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 ZMAT3Q9HA38 289 aaKnown RBP5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 DKK3Q9UBP4 350 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 INSL6Q9Y581 213 aa5.75□□□□□ -1.49
RNU4-28P-201ENST00000364739 MPPED1O15442 326 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 TRIAP1O43715 76 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 KITP10721 976 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 ITGALP20701 1170 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 SP2Q02086 613 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 TCF15Q12870 199 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 EMC10Q5UCC4 262 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 NPNTQ6UXI9 565 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 ADGRG3Q86Y34 549 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 SLC9A6Q92581 669 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 TSR2Q969E8 191 aaKnown RBP5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 MTFMTQ96DP5 389 aaKnown RBP5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 PGBD1Q96JS3 809 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 DUSP26Q9BV47 211 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 SIK2Q9H0K1 926 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 ASB6Q9NWX5 421 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 SPATA31A3Q5VYP0 1347 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 ADGRA2Q96PE1 1338 aa5.74□□□□□ -1.49
RNU4-28P-201ENST00000364739 PPM1DO15297 605 aa5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 GRPP07492 148 aa5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 CD6P30203 668 aa5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 LILRA4P59901 499 aa5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 EIF2B5Q13144 721 aaKnown RBP5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 TXNRD1Q16881 649 aa5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 FAM102BQ5T8I3 360 aa5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 DDX17Q92841 729 aaKnown RBP5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 BBC3Q96PG8 261 aaPredicted RBP5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 HEPHQ9BQS7 1158 aa5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 B3GNT5Q9BYG0 378 aa5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 KLK15Q9H2R5 256 aa5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 SERHLQ9NQF3 203 aa5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 HESX1Q9UBX0 185 aa5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 FNDC1Q4ZHG4 1894 aaPredicted RBP5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 SPATA31A6Q5VVP1 1343 aa5.73□□□□□ -1.49
RNU4-28P-201ENST00000364739 LINC00473A8K010 186 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 PPFIA2O75334 1257 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 TUSC2O75896 110 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 ERBB2P04626 1255 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 NR2F6P10588 404 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 NPR1P16066 1061 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 GRIA3P42263 894 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 UCP3P55916 312 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 PTPRRQ15256 657 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 LONRF3Q496Y0 759 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 SWSAP1Q6NVH7 229 aa5.72□□□□□ -1.49
RNU4-28P-201ENST00000364739 RD3Q7Z3Z2 195 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms