RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 CXCL12P48061 93 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 SOX9P48436 509 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 TFAMQ00059 246 aaKnown RBP8.82□□□□□ -1
RNU4-59P-201ENST00000364447 PLCB2Q00722 1185 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 TSPY1Q01534 308 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 CEBPZQ03701 1054 aaKnown RBP8.82□□□□□ -1
RNU4-59P-201ENST00000364447 PTPAQ15257 358 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 L1TD1Q5T7N2 865 aaKnown RBP8.82□□□□□ -1
RNU4-59P-201ENST00000364447 CRELD2Q6UXH1 353 aaPredicted RBP8.82□□□□□ -1
RNU4-59P-201ENST00000364447 MAMSTRQ6ZN01 415 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 PRR23BQ6ZRT6 265 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 RALGPS2Q86X27 583 aaPredicted RBP8.82□□□□□ -1
RNU4-59P-201ENST00000364447 EFCAB13Q8IY85 973 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 SYCP3Q8IZU3 236 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 SPEM1Q8N4L4 309 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 TTC8Q8TAM2 541 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 BPIFB1Q8TDL5 484 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 GIPC2Q8TF65 315 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 NOC3LQ8WTT2 800 aaKnown RBP8.82□□□□□ -1
RNU4-59P-201ENST00000364447 SAAL1Q96ER3 474 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 ZFYVE19Q96K21 471 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 CLIC6Q96NY7 704 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 MKNK1Q9BUB5 465 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 IKZF4Q9H2S9 585 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 TASP1Q9H6P5 420 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 RBM12Q9NTZ6 932 aaKnown RBP8.82□□□□□ -1
RNU4-59P-201ENST00000364447 OBP2AQ9NY56 170 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 RBAKQ9NYW8 714 aaPredicted RBP8.82□□□□□ -1
RNU4-59P-201ENST00000364447 FBXO2Q9UK22 296 aaPredicted RBP8.82□□□□□ -1
RNU4-59P-201ENST00000364447 USP18Q9UMW8 372 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 PCDHB5Q9Y5E4 795 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 PCDHB13Q9Y5F0 798 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 SRPRBQ9Y5M8 271 aaKnown RBP8.82□□□□□ -1
RNU4-59P-201ENST00000364447 CACNA1AO00555 2505 aa8.82□□□□□ -1
RNU4-59P-201ENST00000364447 GPR179Q6PRD1 2367 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 RALGAPA1Q6GYQ0 2036 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 CEP250Q9BV73 2442 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 MYBPHLA2RUH7 354 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 HUS1O60921 280 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 PPP1R37O75864 691 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 LDHAP00338 332 aaKnown RBP8.81□□□□□ -1
RNU4-59P-201ENST00000364447 ITGB3P05106 788 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 HAPLN1P10915 354 aaPredicted RBP8.81□□□□□ -1
RNU4-59P-201ENST00000364447 ADSSP30520 456 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 POLR2BP30876 1174 aaKnown RBP8.81□□□□□ -1
RNU4-59P-201ENST00000364447 AVPR1AP37288 418 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 SATB1Q01826 763 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 LMNB2Q03252 620 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 KCNA1Q09470 495 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 BFSP1Q12934 665 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 RESTQ13127 1097 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 CUL4AQ13619 759 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 ALCAMQ13740 583 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 PON2Q15165 354 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 LPAL2Q16609 132 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 RSPO4Q2I0M5 234 aaPredicted RBP8.81□□□□□ -1
RNU4-59P-201ENST00000364447 ITPRIPL2Q3MIP1 535 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 DGKKQ5KSL6 1271 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 LAIR1Q6GTX8 287 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 CCDC73Q6ZRK6 1079 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 BRSK2Q8IWQ3 736 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 CELF5Q8N6W0 485 aaKnown RBP8.81□□□□□ -1
RNU4-59P-201ENST00000364447 CACTINQ8WUQ7 758 aaKnown RBP8.81□□□□□ -1
RNU4-59P-201ENST00000364447 SMG9Q9H0W8 520 aaKnown RBP8.81□□□□□ -1
RNU4-59P-201ENST00000364447 OLFML3Q9NRN5 406 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 DLL3Q9NYJ7 618 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 GTSE1Q9NYZ3 720 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 ZMYM5Q9UJ78 669 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 ITGA11Q9UKX5 1188 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 CDV3Q9UKY7 258 aaKnown RBP8.81□□□□□ -1
RNU4-59P-201ENST00000364447 MAGED2Q9UNF1 606 aaPredicted RBP8.81□□□□□ -1
RNU4-59P-201ENST00000364447 AGAP1Q9UPQ3 857 aa8.81□□□□□ -1
RNU4-59P-201ENST00000364447 R3HCC1Q9Y3T6 440 aaKnown RBP8.81□□□□□ -1
RNU4-59P-201ENST00000364447 DMXL1Q9Y485 3027 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 DCHS1Q96JQ0 3298 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 MED19A0JLT2 244 aaPredicted RBP8.8□□□□□ -1
RNU4-59P-201ENST00000364447 GOLGA8IPA6NC78 632 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 GOLGA8JA6NMD2 632 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 PRR5-ARHGAP8B1AHC4 643 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 CHURC1-FNTBB4DL54 471 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 PRPF40AO75400 957 aaKnown RBP8.8□□□□□ -1
RNU4-59P-201ENST00000364447 KRT19P08727 400 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 TMEM191BP0C7N4 346 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 CSH1P0DML2 217 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 CSH2P0DML3 217 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 TDGF1P13385 188 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 SYT1P21579 422 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 GARTP22102 1010 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 DDX6P26196 483 aaKnown RBP eCLIP8.8□□□□□ -1
RNU4-59P-201ENST00000364447 WEE1P30291 646 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 FNTBP49356 437 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 CASP5P51878 434 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 RPL10AP62906 217 aaKnown RBP8.8□□□□□ -1
RNU4-59P-201ENST00000364447 ARHGAP8P85298 464 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 MYL7Q01449 175 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 TNK2Q07912 1038 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 NFE2Q16621 373 aaPredicted RBP8.8□□□□□ -1
RNU4-59P-201ENST00000364447 HEATR6Q6AI08 1181 aaKnown RBP8.8□□□□□ -1
RNU4-59P-201ENST00000364447 FAM173BQ6P4H8 233 aa8.8□□□□□ -1
RNU4-59P-201ENST00000364447 TXNDC11Q6PKC3 985 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms