RNA–Protein interactions for RNA: ENST00000362025.9

RAB3IP-202, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-202ENST00000362025 ARHGAP15Q53QZ3 475 aa18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 C1orf127Q8N9H9 656 aa18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 LINC00301Q8NCQ3 95 aa18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 TFIP11Q9UBB9 837 aaKnown RBP18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 LDHAP00338 332 aaKnown RBP18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 HAPLN1P10915 354 aaPredicted RBP18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 PNPLA4P41247 253 aa18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 FCHO2Q0JRZ9 810 aa18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 DCP1BQ8IZD4 617 aaKnown RBP18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 SUMF1Q8NBK3 374 aa18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 CSGALNACT1Q8TDX6 532 aa18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 C2orf15Q8WU43 125 aaKnown RBP18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 ATRIPQ8WXE1 791 aa18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 HPS3Q969F9 1004 aa18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 LMAN1LQ9HAT1 526 aa18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 IL21Q9HBE4 155 aa18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 PDE11AQ9HCR9 933 aa18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 TMLHEQ9NVH6 421 aa18.22■□□□□ 0.51
RAB3IP-202ENST00000362025 DPYSL4O14531 572 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 CHADO15335 359 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 EXTL3O43909 919 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 SOX9P48436 509 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 SMARCB1Q12824 385 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 TAF12Q16514 161 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 CCDC65Q8IXS2 484 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 KIAA2013Q8IYS2 634 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 PDCL2Q8N4E4 241 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 DCLK2Q8N568 766 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 GLIS3Q8NEA6 775 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 TTC8Q8TAM2 541 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 SPPL2BQ8TCT7 592 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 CACTINQ8WUQ7 758 aaKnown RBP18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 ZFYVE19Q96K21 471 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 CHRDQ9H2X0 955 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 PRMT8Q9NR22 394 aaPredicted RBP18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 ZSCAN32Q9NX65 697 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 PCDHGA2Q9Y5H1 932 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 EP300Q09472 2414 aaPredicted RBP18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 COL4A2P08572 1712 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 SLC38A8A6NNN8 435 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 SPTLC2O15270 562 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 PRAMEF12O95522 483 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 BFSP1Q12934 665 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 CSGALNACT2Q8N6G5 542 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 CXorf38Q8TB03 319 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 TASP1Q9H6P5 420 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 TMEM206Q9H813 350 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 L1RE1Q9UN81 338 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 PCDHB5Q9Y5E4 795 aa18.21■□□□□ 0.51
RAB3IP-202ENST00000362025 PATJQ8NI35 1801 aa18.21■□□□□ 0.5
RAB3IP-202ENST00000362025 F5P12259 2224 aa18.2■□□□□ 0.5
RAB3IP-202ENST00000362025 CDC25CP30307 473 aa18.2■□□□□ 0.5
RAB3IP-202ENST00000362025 KPNA1P52294 538 aaPredicted RBP18.2■□□□□ 0.5
RAB3IP-202ENST00000362025 FOXD4L5Q5VV16 416 aaPredicted RBP18.2■□□□□ 0.5
RAB3IP-202ENST00000362025 FOXD4L4Q8WXT5 416 aaPredicted RBP18.2■□□□□ 0.5
RAB3IP-202ENST00000362025 RUBCNQ92622 972 aa18.2■□□□□ 0.5
RAB3IP-202ENST00000362025 GCNAQ96QF7 691 aa18.2■□□□□ 0.5
RAB3IP-202ENST00000362025 SMG9Q9H0W8 520 aaKnown RBP18.2■□□□□ 0.5
RAB3IP-202ENST00000362025 KRT19P08727 400 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 ACAT1P24752 427 aaKnown RBP18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 ID4P47928 161 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 GPR15P49685 360 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 TSPY1Q01534 308 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 E2F4Q16254 413 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 LMBRD2Q68DH5 695 aaPredicted RBP18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 GPD1LQ8N335 351 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 ZBTB44Q8NCP5 570 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 NELL1Q92832 810 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 ZNF396Q96N95 335 aaPredicted RBP18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 PI4K2AQ9BTU6 479 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 SLC46A2Q9BY10 475 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 MTMR12Q9C0I1 747 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 ITGA11Q9UKX5 1188 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 TICRRQ7Z2Z1 1910 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 HUS1O60921 280 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 CHRNB1P11230 501 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 LRRC52Q8N7C0 313 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 STKLD1Q8NE28 680 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 DHX58Q96C10 678 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 TNMDQ9H2S6 317 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 DDX43Q9NXZ2 648 aaKnown RBP18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 GTSE1Q9NYZ3 720 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 SIX4Q9UIU6 781 aa18.19■□□□□ 0.5
RAB3IP-202ENST00000362025 PRPF40AO75400 957 aaKnown RBP18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 MLLT6P55198 1093 aaPredicted RBP18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 RBP5P82980 135 aa18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 ARHGAP29Q52LW3 1261 aa18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 SDHAF4Q5VUM1 108 aa18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 TRIM9Q9C026 710 aa18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 C8orf33Q9H7E9 229 aaPredicted RBP18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 RBM12Q9NTZ6 932 aaKnown RBP18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 KBTBD4Q9NVX7 518 aa18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 OBP2AQ9NY56 170 aa18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 SNX9Q9Y5X1 595 aa18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 FANCMQ8IYD8 2048 aa18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 PPP6R2O75170 966 aa18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 TMEM191BP0C7N4 346 aa18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 HMGA1P17096 107 aaKnown RBP18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 HOXD13P35453 343 aa18.18■□□□□ 0.5
RAB3IP-202ENST00000362025 NFE2Q16621 373 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms