RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 OSBPP22059 807 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 PTPN4P29074 926 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 GPC3P51654 580 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 TMEM259Q4ZIN3 620 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 THEMIS2Q5TEJ8 643 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 C1orf186Q6ZWK4 172 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 LRRC6Q86X45 466 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 RYBPQ8N488 228 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-201ENST00000361866 EXT2Q93063 718 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 HERC5Q9UII4 1024 aaKnown RBP14.57□□□□□ -0.08
COL6A1-201ENST00000361866 COG5Q9UP83 839 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 FNDC3AQ9Y2H6 1198 aaKnown RBP14.57□□□□□ -0.08
COL6A1-201ENST00000361866 ADCY3O60266 1144 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 CALB2P22676 271 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 SH3BGRP55822 239 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-201ENST00000361866 PRKCEQ02156 737 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 CPNE8Q86YQ8 564 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 PPIL6Q8IXY8 311 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 TMEM120AQ9BXJ8 343 aa14.57□□□□□ -0.08
COL6A1-201ENST00000361866 SUDS3Q9H7L9 328 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-201ENST00000361866 ZNF277Q9NRM2 450 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-201ENST00000361866 ATP9BO43861 1147 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 UNC5CO95185 931 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 SNRPAP09012 282 aaKnown RBP14.56□□□□□ -0.08
COL6A1-201ENST00000361866 CUL2Q13617 745 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 GPR162Q16538 588 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 Q3C1V9 767 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 PTF1AQ7RTS3 328 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 UBA3Q8TBC4 463 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 STK32AQ8WU08 396 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 PSPC1Q8WXF1 523 aaKnown RBP14.56□□□□□ -0.08
COL6A1-201ENST00000361866 CYP26B1Q9NR63 512 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 MCM8Q9UJA3 840 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 AJAP1Q9UKB5 411 aaPredicted RBP14.56□□□□□ -0.08
COL6A1-201ENST00000361866 AFG3L2Q9Y4W6 797 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 FER1L4A9Z1Z3 1794 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 ANKRD63C9JTQ0 380 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 ENO3P13929 434 aaPredicted RBP14.56□□□□□ -0.08
COL6A1-201ENST00000361866 AP1B1Q10567 949 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 PIGHQ14442 188 aaPredicted RBP14.56□□□□□ -0.08
COL6A1-201ENST00000361866 RC3H1Q5TC82 1133 aaKnown RBP14.56□□□□□ -0.08
COL6A1-201ENST00000361866 DCAF15Q66K64 600 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 ANO5Q75V66 913 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 BZW1Q7L1Q6 419 aaKnown RBP14.56□□□□□ -0.08
COL6A1-201ENST00000361866 LCA5Q86VQ0 697 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 PRPF31Q8WWY3 499 aaKnown RBP14.56□□□□□ -0.08
COL6A1-201ENST00000361866 FOXP3Q9BZS1 431 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 SSX2IPQ9Y2D8 614 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 PIK3CDO00329 1044 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 EEF1B2P24534 225 aaKnown RBP14.56□□□□□ -0.08
COL6A1-201ENST00000361866 DEUP1Q05D60 604 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 RASA2Q15283 850 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 MTFR1Q15390 333 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 CNGA3Q16281 694 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 CLEC16AQ2KHT3 1053 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 JADE1Q6IE81 842 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 TTC27Q6P3X3 843 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 FITM2Q8N6M3 262 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 RNPEPL1Q9HAU8 725 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 PCYOX1Q9UHG3 505 aa14.56□□□□□ -0.08
COL6A1-201ENST00000361866 SLC26A4O43511 780 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 HNRNPCL1O60812 293 aaKnown RBP14.55□□□□□ -0.08
COL6A1-201ENST00000361866 RASSF9O75901 435 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 PARD3BQ8TEW8 1205 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 ZNF75CPQ92670 426 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-201ENST00000361866 ZBTB7AO95365 584 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 AQP5P55064 265 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 ESRRGP62508 458 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 SLC12A1Q13621 1099 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 TKFCQ3LXA3 575 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 IZUMO2Q6UXV1 221 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 CLMNQ96JQ2 1002 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 RMDN2Q96LZ7 410 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 CRAMP1Q96RY5 1269 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 FBXO40Q9UH90 709 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 IVNS1ABPQ9Y6Y0 642 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 SRRM3A6NNA2 597 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-201ENST00000361866 OCRLQ01968 901 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 POU5F1BQ06416 359 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 MTMR2Q13614 643 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 KPNB1Q14974 876 aaKnown RBP14.55□□□□□ -0.08
COL6A1-201ENST00000361866 STXBP2Q15833 593 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 COBLL1Q53SF7 1204 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 PDZD4Q76G19 769 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-201ENST00000361866 RNF135Q8IUD6 432 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 TTLL6Q8N841 843 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 TTC8Q8TAM2 541 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 PIK3R5Q8WYR1 880 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 TRPV6Q9H1D0 765 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 RPAP3Q9H6T3 665 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-201ENST00000361866 LRRC4Q9HBW1 653 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.55□□□□□ -0.08
COL6A1-201ENST00000361866 GTSE1Q9NYZ3 720 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 DCCP43146 1447 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 DDX3YO15523 660 aaKnown RBP14.55□□□□□ -0.08
COL6A1-201ENST00000361866 CSDE1O75534 798 aaKnown RBP14.55□□□□□ -0.08
COL6A1-201ENST00000361866 VCAM1P19320 739 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 SOX11P35716 441 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 PAPOLAP51003 745 aaKnown RBP14.55□□□□□ -0.08
COL6A1-201ENST00000361866 STRIP1Q5VSL9 837 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms