RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 GYS2P54840 703 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 PLA2G4FQ68DD2 849 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 LRRC8EQ6NSJ5 796 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 CARNMT1Q8N4J0 409 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 WDCPQ9H6R7 721 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 TBKBP1A7MCY6 615 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 TADA3O75528 432 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 SOAT2O75908 522 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 LHX1P48742 406 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 TRPC1P48995 793 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 GEMP55040 296 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 DMC1Q14565 340 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 BEND6Q5SZJ8 279 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-203ENST00000361654 SRBD1Q8N5C6 995 aaKnown RBP11.44□□□□□ -0.58
CLIP1-203ENST00000361654 NBPF15Q8N660 670 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 TAAR1Q96RJ0 339 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 RAD18Q9NS91 495 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLIP1-203ENST00000361654 INTUQ9ULD6 942 aa11.44□□□□□ -0.58
CLIP1-203ENST00000361654 GPR75-ASB3A0A0A6YYF3 556 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 RASSF10A6NK89 507 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 EVPLLA8MZ36 301 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 EPHB2P29323 1055 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 STAT4Q14765 748 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 PTPN21Q16825 1174 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 C10orf53Q8N6V4 93 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 NLNQ9BYT8 704 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 KCNF1Q9H3M0 494 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 GOLPH3LQ9H4A5 285 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 PSMD12O00232 456 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-203ENST00000361654 PCDH8O95206 1070 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 POLBP06746 335 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 C1orf167Q5SNV9 1468 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 C1orf146Q5VVC0 180 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 LRRC8BQ6P9F7 803 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 PLEKHM3Q6ZWE6 761 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 ELOA2Q8IYF1 753 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-203ENST00000361654 ZNF557Q8N988 423 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-203ENST00000361654 KRCC1Q9NPI7 259 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-203ENST00000361654 RAB6BQ9NRW1 208 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 A0A1W2PQC6 194 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 ICE2Q659A1 982 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 MRNIPQ6NTE8 343 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 BHMTQ93088 406 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 MAGEB10Q96LZ2 347 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-203ENST00000361654 C1QTNF7Q9BXJ2 289 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 WWP1Q9H0M0 922 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 SMYD3Q9H7B4 428 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 DDIT4Q9NX09 232 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 MRFAP1Q9Y605 127 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 PP2D1A8MPX8 630 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 VWA5AO00534 786 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 SPAG6O75602 509 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 FBXO21O94952 628 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 MYBP10242 640 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 PDHBP11177 359 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 IMPDH2P12268 514 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 ITGALP20701 1170 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 ACO1P21399 889 aaKnown RBP11.43□□□□□ -0.58
CLIP1-203ENST00000361654 FMO5P49326 533 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 BOLA3Q53S33 107 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 TIGD7Q6NT04 549 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-203ENST00000361654 MCEEQ96PE7 176 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 REEP2Q9BRK0 252 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 C20orf96Q9NUD7 363 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-203ENST00000361654 WWOXQ9NZC7 414 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 KLK14Q9P0G3 267 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 ZC3H7BQ9UGR2 993 aaKnown RBP11.43□□□□□ -0.58
CLIP1-203ENST00000361654 TRMT6Q9UJA5 497 aaKnown RBP11.43□□□□□ -0.58
CLIP1-203ENST00000361654 VPS28Q9UK41 221 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 FBXO10Q9UK96 956 aa11.43□□□□□ -0.58
CLIP1-203ENST00000361654 IFRD1O00458 451 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-203ENST00000361654 CABYRO75952 493 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 FAM47EQ6ZV65 393 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 FBXO33Q7Z6M2 555 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 ZNF512BQ96KM6 892 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-203ENST00000361654 CYP4F11Q9HBI6 524 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.42□□□□□ -0.58
CLIP1-203ENST00000361654 PDHXO00330 501 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 CYB561D2O14569 222 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 OGTO15294 1046 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 ITGB3P05106 788 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 SKP1P63208 163 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 TOB2Q14106 344 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-203ENST00000361654 MIB1Q86YT6 1006 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 TEX9Q8N6V9 391 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 C1orf54Q8WWF1 131 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 MAP3K14Q99558 947 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 ELAC2Q9BQ52 826 aaKnown RBP11.42□□□□□ -0.58
CLIP1-203ENST00000361654 SH2D3AQ9BRG2 576 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 OXCT2Q9BYC2 517 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-203ENST00000361654 DYRK1BQ9Y463 629 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 RGL2O15211 777 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 RHOCP08134 193 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 RASA1P20936 1047 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 PRKAA1Q13131 559 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 SLC9A5Q14940 896 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 PPM1LQ5SGD2 360 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 UNC45BQ8IWX7 931 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 MKNK1Q9BUB5 465 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms