RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 REREQ9P2R6 1566 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 HOXA2O43364 376 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 CKMP06732 381 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 PLEKP08567 350 aaPredicted RBP19.43■□□□□ 0.7
CLIP2-202ENST00000361545 CXCL8P10145 99 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 ARFIP2P53365 341 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 GRAMD1BQ3KR37 738 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 ARHGAP18Q8N392 663 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 SHCBP1Q8NEM2 672 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 ELMO2Q96JJ3 720 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 ERGIC2Q96RQ1 377 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 FAM96AQ9H5X1 160 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 E2F8A0AVK6 867 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 E2F6O75461 281 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 URODP06132 367 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 PDE1CQ14123 709 aaPredicted RBP19.43■□□□□ 0.7
CLIP2-202ENST00000361545 SYDE1Q6ZW31 735 aaPredicted RBP19.43■□□□□ 0.7
CLIP2-202ENST00000361545 USP50Q70EL3 339 aaPredicted RBP19.43■□□□□ 0.7
CLIP2-202ENST00000361545 ZNF720Q7Z2F6 126 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 TLK2Q86UE8 772 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 KCNB2Q92953 911 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 COG4Q9H9E3 785 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 XPNPEP3Q9NQH7 507 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 FGFR1OP2Q9NVK5 253 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 ZNF212Q9UDV6 495 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 AP3B1O00203 1094 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 POMCP01189 267 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 GARTP22102 1010 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 PPATQ06203 517 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 USP10Q14694 798 aaKnown RBP19.43■□□□□ 0.7
CLIP2-202ENST00000361545 STAT4Q14765 748 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 KRT80Q6KB66 452 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 MAP3K6O95382 1288 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 TGFB3P10600 412 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 VSNL1P62760 191 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 ACAD10Q6JQN1 1059 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 GPR63Q9BZJ6 419 aa19.43■□□□□ 0.7
CLIP2-202ENST00000361545 MBL2P11226 248 aaPredicted RBP19.42■□□□□ 0.7
CLIP2-202ENST00000361545 VCPP55072 806 aaKnown RBP19.42■□□□□ 0.7
CLIP2-202ENST00000361545 FAM71DQ8N9W8 422 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 CYFIP2Q96F07 1278 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 MTG1Q9BT17 334 aaPredicted RBP19.42■□□□□ 0.7
CLIP2-202ENST00000361545 TRIM15Q9C019 465 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 KCNF1Q9H3M0 494 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 TMEM150BA6NC51 233 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 FAM86B1E9PN63 330 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 FAM86B2P0C5J1 330 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 ERVK-9P63128 1117 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 ERVK-24P63145 666 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 ATP6V0D2Q8N8Y2 350 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 CGRRF1Q99675 332 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 LRRC4BQ9NT99 713 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 C20orf96Q9NUD7 363 aaPredicted RBP19.42■□□□□ 0.7
CLIP2-202ENST00000361545 KBTBD4Q9NVX7 518 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 SNTG2Q9NY99 539 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 SLC11A2P49281 568 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 RASIP1Q5U651 963 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 CCDC124Q96CT7 223 aaKnown RBP19.42■□□□□ 0.7
CLIP2-202ENST00000361545 ATP6V1G3Q96LB4 118 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 RBM12Q9NTZ6 932 aaKnown RBP19.42■□□□□ 0.7
CLIP2-202ENST00000361545 VIL1P09327 827 aaKnown RBP19.42■□□□□ 0.7
CLIP2-202ENST00000361545 GHRP10912 638 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 MYL6P60660 151 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 PIP4K2CQ8TBX8 421 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 ZNF507Q8TCN5 953 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 TAS1R2Q8TE23 839 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 CENPKQ9BS16 269 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 TRABDQ9H4I3 376 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 TIMM13Q9Y5L4 95 aaPredicted RBP19.42■□□□□ 0.7
CLIP2-202ENST00000361545 DISP2A7MBM2 1401 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 PRR23AA6NEV1 266 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 HAUS5O94927 633 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 AKR1A1P14550 325 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 GRIK5Q16478 980 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 MRPS31Q92665 395 aaKnown RBP19.42■□□□□ 0.7
CLIP2-202ENST00000361545 ABHD16BQ9H3Z7 469 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 PAK5Q9P286 719 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 ADAM21Q9UKJ8 722 aa19.42■□□□□ 0.7
CLIP2-202ENST00000361545 VWDEQ8N2E2 1590 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 ZNF263O14978 683 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 PTPRAP18433 802 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 ITIH2P19823 946 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 ARHGDIAP52565 204 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 TMC7Q7Z402 723 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 SLC26A7Q8TE54 656 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 KPNA6O60684 536 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 TMEM132BQ14DG7 1078 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 EFTUD2Q15029 972 aaKnown RBP eCLIP19.41■□□□□ 0.7
CLIP2-202ENST00000361545 FBXO41Q8TF61 875 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 FOPNLQ96NB1 174 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 SEMA6BQ9H3T3 888 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 ADA2Q9NZK5 511 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.41■□□□□ 0.7
CLIP2-202ENST00000361545 RAG1P15918 1043 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 AKAP5P24588 427 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 ADCYAP1R1P41586 468 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 ZNF177Q13360 481 aaPredicted RBP19.41■□□□□ 0.7
CLIP2-202ENST00000361545 LONRF1Q17RB8 773 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 CCDC33Q8N5R6 958 aa19.41■□□□□ 0.7
CLIP2-202ENST00000361545 SCFD1Q8WVM8 642 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms