RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 C17orf99Q6UX52 265 aa12.3□□□□□ -0.44
HPS1-204ENST00000361490 GPATCH2LQ9NWQ4 482 aa12.3□□□□□ -0.44
HPS1-204ENST00000361490 FAM153AQ9UHL3 310 aa12.3□□□□□ -0.44
HPS1-204ENST00000361490 INTUQ9ULD6 942 aa12.3□□□□□ -0.44
HPS1-204ENST00000361490 CCDC66A2RUB6 948 aa12.3□□□□□ -0.44
HPS1-204ENST00000361490 A6NJR5 290 aa12.3□□□□□ -0.44
HPS1-204ENST00000361490 CCDC130P13994 396 aa12.3□□□□□ -0.44
HPS1-204ENST00000361490 CAPN2P17655 700 aa12.3□□□□□ -0.44
HPS1-204ENST00000361490 HOXD10P28358 340 aa12.3□□□□□ -0.44
HPS1-204ENST00000361490 SCNN1GP51170 649 aa12.3□□□□□ -0.44
HPS1-204ENST00000361490 SMAD1Q15797 465 aaKnown RBP12.3□□□□□ -0.44
HPS1-204ENST00000361490 KRT71Q3SY84 523 aa12.3□□□□□ -0.44
HPS1-204ENST00000361490 RNF180Q86T96 592 aa12.3□□□□□ -0.44
HPS1-204ENST00000361490 ZC3H18Q86VM9 953 aaKnown RBP12.3□□□□□ -0.44
HPS1-204ENST00000361490 RAB17Q9H0T7 212 aa12.3□□□□□ -0.44
HPS1-204ENST00000361490 RNF186Q9NXI6 227 aa12.3□□□□□ -0.44
HPS1-204ENST00000361490 MTRF1LQ9UGC7 380 aaKnown RBP12.3□□□□□ -0.44
HPS1-204ENST00000361490 ATAD5Q96QE3 1844 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 GAS8O95995 478 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 KRT14P02533 472 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 ZNF865P0CJ78 1059 aaPredicted RBP12.29□□□□□ -0.44
HPS1-204ENST00000361490 ANXA13P27216 316 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 NME3Q13232 169 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 ZNF354CQ86Y25 554 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 RHOT1Q8IXI2 618 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 MRPL45Q9BRJ2 306 aaKnown RBP12.29□□□□□ -0.44
HPS1-204ENST00000361490 FUT8Q9BYC5 575 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 WNT8AQ9H1J5 351 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 ISCUQ9H1K1 167 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 RFC1P35251 1148 aaPredicted RBP12.29□□□□□ -0.44
HPS1-204ENST00000361490 EPHB4P54760 987 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 CACNB2Q08289 660 aaPredicted RBP12.29□□□□□ -0.44
HPS1-204ENST00000361490 FBXO47Q5MNV8 452 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 SCN4BQ8IWT1 228 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 SH3TC2Q8TF17 1288 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 CASKIN2Q8WXE0 1202 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 KAT2BQ92831 832 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 B3GNT5Q9BYG0 378 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 DNAI2Q9GZS0 605 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 ASB7Q9H672 318 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 MAGED2Q9UNF1 606 aaPredicted RBP12.29□□□□□ -0.44
HPS1-204ENST00000361490 KIAA1217Q5T5P2 1943 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 GOLGA6CA6NDK9 693 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 ECEL1O95672 775 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 SLC10A3P09131 477 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 GOLGA6DP0CG33 693 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 NOMO3P69849 1222 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 MARCH8Q5T0T0 291 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 DPY19L2P1Q6NXN4 242 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 TRIM72Q6ZMU5 477 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 ZNF410Q86VK4 478 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 LRRC57Q8N9N7 239 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 ADAM2Q99965 735 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 GOLGA6AQ9NYA3 693 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 SLC45A1Q9Y2W3 748 aa12.29□□□□□ -0.44
HPS1-204ENST00000361490 COL11A1P12107 1806 aaPredicted RBP12.28□□□□□ -0.44
HPS1-204ENST00000361490 IGKV6-21A0A0C4DH24 114 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 A0A1B0GUA9 196 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 PRPSAP2O60256 369 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 MICAL2O94851 1124 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 ACSL3O95573 720 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 CCDC142Q17RM4 750 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 MAMDC4Q6UXC1 1216 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 CCDC89Q8N998 374 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 NDRG1Q92597 394 aaKnown RBP12.28□□□□□ -0.44
HPS1-204ENST00000361490 ZMAT2Q96NC0 199 aaKnown RBP12.28□□□□□ -0.44
HPS1-204ENST00000361490 ERVK-5Q9HDB9 667 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 SIX4Q9UIU6 781 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 UBQLN1Q9UMX0 589 aaKnown RBP12.28□□□□□ -0.44
HPS1-204ENST00000361490 E5RJQ4 531 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 H7C0C1 242 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 PQBP1O60828 265 aaKnown RBP12.28□□□□□ -0.44
HPS1-204ENST00000361490 ATP5OP48047 213 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 DCAF4L1Q3SXM0 396 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 CDCA2Q69YH5 1023 aaPredicted RBP12.28□□□□□ -0.44
HPS1-204ENST00000361490 GDF6Q6KF10 455 aaPredicted RBP12.28□□□□□ -0.44
HPS1-204ENST00000361490 C1orf228Q6PIY5 440 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 NETO2Q8NC67 525 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 STARD7Q9NQZ5 370 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 IP6K2Q9UHH9 426 aa12.28□□□□□ -0.44
HPS1-204ENST00000361490 SMIM28A0A1B0GU29 152 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 CCDC188H7C350 402 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 CLDN5O00501 218 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 CYB561D2O14569 222 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 B4GALT4O60513 344 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 RNF40O75150 1001 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 F2P00734 622 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 PRLRP16471 622 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 PLA2G4AP47712 749 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 CDH6P55285 790 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 MAMLD1Q13495 774 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 UAP1Q16222 522 aaPredicted RBP12.27□□□□□ -0.44
HPS1-204ENST00000361490 C15orf59Q2T9L4 293 aaPredicted RBP12.27□□□□□ -0.44
HPS1-204ENST00000361490 ZNF618Q5T7W0 954 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 ZNF467Q7Z7K2 595 aaPredicted RBP12.27□□□□□ -0.44
HPS1-204ENST00000361490 SIX6OS1Q8N1H7 587 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 RSAD2Q8WXG1 361 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 FMO2Q99518 471 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 SELENOSQ9BQE4 189 aa12.27□□□□□ -0.44
HPS1-204ENST00000361490 OSBPL8Q9BZF1 889 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms