RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 C3orf70A6NLC5 250 aaPredicted RBP14.55□□□□□ -0.08
CTR9-201ENST00000361367 LACTBL1A8MY62 500 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 FKTNO75072 461 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 RRM1P23921 792 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 ZNF280DQ6N043 979 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 KDELC2Q7Z4H8 507 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 CCDC197Q8NCU1 140 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 SLC20A1Q8WUM9 679 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 EXT2Q93063 718 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 PDGFCQ9NRA1 345 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 SMARCAL1Q9NZC9 954 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 ARHGAP20Q9P2F6 1191 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 FIS1Q9Y3D6 152 aa14.55□□□□□ -0.08
CTR9-201ENST00000361367 TIMM13Q9Y5L4 95 aaPredicted RBP14.55□□□□□ -0.08
CTR9-201ENST00000361367 MAFO75444 373 aaPredicted RBP14.54□□□□□ -0.08
CTR9-201ENST00000361367 SPATA31C1P0DKV0 1188 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 IL31Q6EBC2 164 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 SYDE1Q6ZW31 735 aaPredicted RBP14.54□□□□□ -0.08
CTR9-201ENST00000361367 ZNF571Q7Z3V5 609 aaPredicted RBP14.54□□□□□ -0.08
CTR9-201ENST00000361367 USP33Q8TEY7 942 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 DPF3Q92784 378 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 FAM118BQ9BPY3 351 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 VPS11Q9H270 941 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.54□□□□□ -0.08
CTR9-201ENST00000361367 MOSPD1Q9UJG1 213 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 SMIM10L2AP0DMW4 78 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 SMIM10L2BP0DMW5 78 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 EPHB2P29323 1055 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 SMAD1Q15797 465 aaKnown RBP14.54□□□□□ -0.08
CTR9-201ENST00000361367 TRIM51Q9BSJ1 452 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 CARD9Q9H257 536 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 CATSPERBQ9H7T0 1116 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 TBKBP1A7MCY6 615 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 PDK1Q15118 436 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 ANO4Q32M45 955 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 ARHGEF26Q96DR7 871 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 ADAM2Q99965 735 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 MMTAG2Q9BU76 263 aaKnown RBP14.54□□□□□ -0.08
CTR9-201ENST00000361367 ABCF3Q9NUQ8 709 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 SNCAIPQ9Y6H5 919 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 TARSL2A2RTX5 802 aaKnown RBP14.54□□□□□ -0.08
CTR9-201ENST00000361367 NR1H3Q13133 447 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
CTR9-201ENST00000361367 OVOS1Q6IE37 1185 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 MIB1Q86YT6 1006 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 TMEM161BQ8NDZ6 487 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 RAPGEF5Q92565 580 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 FBXO32Q969P5 355 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 PACSIN1Q9BY11 444 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 KRT82Q9NSB4 513 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 RBM12Q9NTZ6 932 aaKnown RBP14.54□□□□□ -0.08
CTR9-201ENST00000361367 BARX2Q9UMQ3 279 aaPredicted RBP14.54□□□□□ -0.08
CTR9-201ENST00000361367 PLIN4Q96Q06 1357 aa14.54□□□□□ -0.08
CTR9-201ENST00000361367 RECQL4O94761 1208 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 RPL10AP62906 217 aaKnown RBP14.53□□□□□ -0.08
CTR9-201ENST00000361367 GTF2BQ00403 316 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 GCNT1Q02742 428 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 MAP7Q14244 749 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 P3H1Q32P28 736 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 SYCP2LQ5T4T6 812 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 TTC17Q96AE7 1141 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 TRAIPQ9BWF2 469 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 SENP6Q9GZR1 1112 aaPredicted RBP14.53□□□□□ -0.08
CTR9-201ENST00000361367 DDX43Q9NXZ2 648 aaKnown RBP14.53□□□□□ -0.08
CTR9-201ENST00000361367 FBXL5Q9UKA1 691 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 PEX10O60683 326 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 STX1BP61266 288 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 MMEL1Q495T6 779 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 MDH1BQ5I0G3 518 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 JADE1Q6IE81 842 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 NT5DC4Q86YG4 428 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 ACSF2Q96CM8 615 aaPredicted RBP14.53□□□□□ -0.08
CTR9-201ENST00000361367 BTBD6Q96KE9 485 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 SYT15Q9BQS2 421 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 WDCPQ9H6R7 721 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 STK38LQ9Y2H1 464 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 DUSP10Q9Y6W6 482 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 LRRIQ3A6PVS8 624 aaPredicted RBP14.53□□□□□ -0.08
CTR9-201ENST00000361367 KLRC4O43908 158 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 LSM8O95777 96 aaKnown RBP14.53□□□□□ -0.08
CTR9-201ENST00000361367 KCNJ1P48048 391 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 NDST1P52848 882 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 VSNL1P62760 191 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 YWHAHQ04917 246 aaPredicted RBP14.53□□□□□ -0.08
CTR9-201ENST00000361367 HSDL1Q3SXM5 330 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 DUSP28Q4G0W2 176 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 ANO5Q75V66 913 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 SPATS2Q86XZ4 545 aaKnown RBP14.53□□□□□ -0.08
CTR9-201ENST00000361367 KIAA0319LQ8IZA0 1049 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 GAD1Q99259 594 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 MUC3BQ9H195 1237 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 BCAP29Q9UHQ4 241 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 FARP2O94887 1054 aaPredicted RBP14.53□□□□□ -0.08
CTR9-201ENST00000361367 SLC2A3P11169 496 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 UGCGQ16739 394 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 TMC7Q7Z402 723 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 ZNF606Q8WXB4 792 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 ELMO3Q96BJ8 720 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 LACRTQ9GZZ8 138 aa14.53□□□□□ -0.08
CTR9-201ENST00000361367 DYRK4Q9NR20 520 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms