RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 HP1BP3Q5SSJ5 553 aaPredicted RBP17.08■□□□□ 0.33
IFT140-201ENST00000361339 KAZNQ674X7 775 aa17.08■□□□□ 0.33
IFT140-201ENST00000361339 CWF19L1Q69YN2 538 aaKnown RBP17.08■□□□□ 0.33
IFT140-201ENST00000361339 CAPN12Q6ZSI9 719 aa17.08■□□□□ 0.33
IFT140-201ENST00000361339 RBBP8NLQ8NC74 664 aaPredicted RBP17.08■□□□□ 0.33
IFT140-201ENST00000361339 VTI1AQ96AJ9 217 aa17.08■□□□□ 0.33
IFT140-201ENST00000361339 DHX33Q9H6R0 707 aaKnown RBP17.08■□□□□ 0.33
IFT140-201ENST00000361339 SLCO1B3Q9NPD5 702 aa17.08■□□□□ 0.33
IFT140-201ENST00000361339 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.08■□□□□ 0.33
IFT140-201ENST00000361339 MAFBQ9Y5Q3 323 aaPredicted RBP17.08■□□□□ 0.33
IFT140-201ENST00000361339 CSDE1O75534 798 aaKnown RBP17.08■□□□□ 0.32
IFT140-201ENST00000361339 CYP1A1P04798 512 aaPredicted RBP17.08■□□□□ 0.32
IFT140-201ENST00000361339 PGK2P07205 417 aa17.08■□□□□ 0.32
IFT140-201ENST00000361339 PTDSS1P48651 473 aaKnown RBP17.08■□□□□ 0.32
IFT140-201ENST00000361339 NOP14P78316 857 aaKnown RBP17.08■□□□□ 0.32
IFT140-201ENST00000361339 CCDC6Q16204 474 aa17.08■□□□□ 0.32
IFT140-201ENST00000361339 CGB2Q6NT52 195 aa17.08■□□□□ 0.32
IFT140-201ENST00000361339 DTX3LQ8TDB6 740 aa17.08■□□□□ 0.32
IFT140-201ENST00000361339 TRIM4Q9C037 500 aa17.08■□□□□ 0.32
IFT140-201ENST00000361339 C17orf75Q9HAS0 396 aa17.08■□□□□ 0.32
IFT140-201ENST00000361339 CNTNAP2Q9UHC6 1331 aa17.08■□□□□ 0.32
IFT140-201ENST00000361339 RGPD3A6NKT7 1758 aaPredicted RBP17.08■□□□□ 0.32
IFT140-201ENST00000361339 RGPD4Q7Z3J3 1758 aa17.08■□□□□ 0.32
IFT140-201ENST00000361339 FZD9O00144 591 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 ARIH2O95376 493 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 FESP07332 822 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 RPS12P25398 132 aaKnown RBP17.07■□□□□ 0.32
IFT140-201ENST00000361339 IVDP26440 423 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 GTF2H1P32780 548 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 DRG2P55039 364 aaKnown RBP17.07■□□□□ 0.32
IFT140-201ENST00000361339 TGFB2P61812 414 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 NOMO3P69849 1222 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 MAMLD1Q13495 774 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 LAMB3Q13751 1172 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 STXBP2Q15833 593 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 ASRGL1Q7L266 308 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 APBB1IPQ7Z5R6 666 aaPredicted RBP17.07■□□□□ 0.32
IFT140-201ENST00000361339 PHC3Q8NDX5 983 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 FAM13CQ8NE31 585 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 NLGN2Q8NFZ4 835 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 HAUS1Q96CS2 278 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 PPP1R16BQ96T49 567 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 DDX50Q9BQ39 737 aaKnown RBP17.07■□□□□ 0.32
IFT140-201ENST00000361339 MTMR12Q9C0I1 747 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 RNPEPL1Q9HAU8 725 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 TJP2Q9UDY2 1190 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 NFASCO94856 1347 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 SOWAHBA6NEL2 793 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 MAFGO15525 162 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 AHCYL1O43865 530 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 CALB2P22676 271 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 ARL2P36404 184 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 ITGA8P53708 1063 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 XRRA1Q6P2D8 792 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 MOB2Q70IA6 237 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 LRRC19Q9H756 370 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 PASKQ96RG2 1323 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 PODXLO00592 558 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 PEX11AO75192 247 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 UNC5CO95185 931 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 OAS1P00973 400 aaKnown RBP17.07■□□□□ 0.32
IFT140-201ENST00000361339 ZSCAN5DPP0CG00 497 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 CENPCQ03188 943 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 VGLL4Q14135 290 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 GBP7Q8N8V2 638 aaPredicted RBP17.07■□□□□ 0.32
IFT140-201ENST00000361339 PRPF31Q8WWY3 499 aaKnown RBP17.07■□□□□ 0.32
IFT140-201ENST00000361339 SLC7A3Q8WY07 619 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 TCHPQ9BT92 498 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 C10orf88Q9H8K7 445 aa17.07■□□□□ 0.32
IFT140-201ENST00000361339 POLR2AP24928 1970 aaKnown RBP17.06■□□□□ 0.32
IFT140-201ENST00000361339 FARP2O94887 1054 aaPredicted RBP17.06■□□□□ 0.32
IFT140-201ENST00000361339 WEE2P0C1S8 567 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 ETS1P14921 441 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 CLDN10P78369 228 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 NBPF20Q3BBV1 942 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 NCAPG2Q86XI2 1143 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 C12orf42Q96LP6 360 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 DCLK3Q9C098 648 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 STMN4Q9H169 189 aaPredicted RBP17.06■□□□□ 0.32
IFT140-201ENST00000361339 A0A0B4J269 797 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 TPBGLP0DKB5 382 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 CETPP11597 493 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 HSPA6P17066 643 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 MYL6P60660 151 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 PTP4A2Q12974 167 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 CALCOCO2Q13137 446 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 NCOA4Q13772 614 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 PPP2R5EQ16537 467 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 DNAJC9Q8WXX5 260 aa17.06■□□□□ 0.32
IFT140-201ENST00000361339 RAB3IPQ96QF0 476 aaPredicted RBP17.06■□□□□ 0.32
IFT140-201ENST00000361339 ANKRD33BA6NCL7 494 aa17.05■□□□□ 0.32
IFT140-201ENST00000361339 FDX1P10109 184 aa17.05■□□□□ 0.32
IFT140-201ENST00000361339 FOXN2P32314 431 aa17.05■□□□□ 0.32
IFT140-201ENST00000361339 OGDHQ02218 1023 aa17.05■□□□□ 0.32
IFT140-201ENST00000361339 KLC1Q07866 573 aa17.05■□□□□ 0.32
IFT140-201ENST00000361339 ZNF252P-AS1Q0IIN9 211 aa17.05■□□□□ 0.32
IFT140-201ENST00000361339 RCN2Q14257 317 aa17.05■□□□□ 0.32
IFT140-201ENST00000361339 SETDB1Q15047 1291 aa17.05■□□□□ 0.32
IFT140-201ENST00000361339 HSDL1Q3SXM5 330 aa17.05■□□□□ 0.32
IFT140-201ENST00000361339 ZFYVE27Q5T4F4 411 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms