RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 VPS33BQ9H267 617 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 VCX3BQ9H321 246 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 VCX3AQ9NNX9 186 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 BATF3Q9NR55 127 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 PXMP2Q9NR77 195 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 ZFATQ9P243 1243 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 FBXO40Q9UH90 709 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 DPPA5A6NC42 116 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 PEX11AO75192 247 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 CYP3A4P08684 503 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 FGFR1P11362 822 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 RRM1P23921 792 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 HADHBP55084 474 aaKnown RBP9.59□□□□□ -0.87
TOP1-201ENST00000361337 ACTR2P61160 394 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 TFAMQ00059 246 aaKnown RBP9.59□□□□□ -0.87
TOP1-201ENST00000361337 FMO1Q01740 532 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 PGM5Q15124 567 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 BRDTQ58F21 947 aaPredicted RBP9.59□□□□□ -0.87
TOP1-201ENST00000361337 TRMT10CQ7L0Y3 403 aaKnown RBP9.59□□□□□ -0.87
TOP1-201ENST00000361337 ANKS1BQ7Z6G8 1248 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 DAW1Q8N136 415 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 PIP4K2CQ8TBX8 421 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 ZNF653Q96CK0 615 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 PITPNM3Q9BZ71 974 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 ROPN1BQ9BZX4 212 aaPredicted RBP9.59□□□□□ -0.87
TOP1-201ENST00000361337 STMN4Q9H169 189 aaPredicted RBP9.59□□□□□ -0.87
TOP1-201ENST00000361337 ROPN1Q9HAT0 212 aaPredicted RBP9.59□□□□□ -0.87
TOP1-201ENST00000361337 IGLV3-22A0A075B6J6 115 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 SPDYE5A6NIY4 337 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 ENTPD5O75356 428 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 T-ENOLP0DO92 83 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 ETS2P15036 469 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 CD19P15391 556 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 GNAZP19086 355 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 EPHB2P29323 1055 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 RFC5P40937 340 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 ACOT2P49753 483 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 RASSF2P50749 326 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 PRKCEQ02156 737 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 MTFR1Q15390 333 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 ANO7Q6IWH7 933 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 OTOP1Q7RTM1 612 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 PDCD7Q8N8D1 485 aaKnown RBP9.59□□□□□ -0.87
TOP1-201ENST00000361337 RNF149Q8NC42 400 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.59□□□□□ -0.87
TOP1-201ENST00000361337 SEMA4DQ92854 862 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 NAF1Q96HR8 494 aaKnown RBP9.59□□□□□ -0.87
TOP1-201ENST00000361337 RPS6KC1Q96S38 1066 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 LRRC19Q9H756 370 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 EIF3DO15371 548 aaKnown RBP eCLIP9.59□□□□□ -0.87
TOP1-201ENST00000361337 GJB1P08034 283 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 ZNF286BP0CG31 522 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 TMED2Q15363 201 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 SCARA5Q6ZMJ2 495 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 ARHGAP22Q7Z5H3 698 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 FAM13CQ8NE31 585 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 RUNDC3BQ96NL0 473 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 TTC1Q99614 292 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 FAM213AQ9BRX8 229 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 POLR3CQ9BUI4 534 aaPredicted RBP9.59□□□□□ -0.87
TOP1-201ENST00000361337 WNT8AQ9H1J5 351 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 R3HDMLQ9H3Y0 253 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 PIDD1Q9HB75 910 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 TXNRD2Q9NNW7 524 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 TBC1D22BQ9NU19 505 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 NXF1Q9UBU9 619 aaKnown RBP9.59□□□□□ -0.87
TOP1-201ENST00000361337 MTUS1Q9ULD2 1270 aa9.59□□□□□ -0.87
TOP1-201ENST00000361337 PECAM1P16284 738 aaPredicted RBP9.58□□□□□ -0.88
TOP1-201ENST00000361337 HSPA6P17066 643 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 KRT15P19012 456 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 ADORA2AP29274 412 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 TCF7P36402 384 aaPredicted RBP9.58□□□□□ -0.88
TOP1-201ENST00000361337 ADCYAP1R1P41586 468 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 CLCN3P51790 818 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 GLIS1Q8NBF1 620 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 PRPF31Q8WWY3 499 aaKnown RBP9.58□□□□□ -0.88
TOP1-201ENST00000361337 HAUS1Q96CS2 278 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 MKNK1Q9BUB5 465 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 AP5M1Q9H0R1 490 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 C2CD2Q9Y426 696 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 GON4LQ3T8J9 2241 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 ARHGAP42A6NI28 874 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 BTBD19C9JJ37 291 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 BCRP11274 1271 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 GAP43P17677 238 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 CD58P19256 250 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 ADCY8P40145 1251 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 PSMC5P62195 406 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 KLC1Q07866 573 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 TTLL4Q14679 1199 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 LCA5Q86VQ0 697 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 C4orf33Q8N1A6 199 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 GBP7Q8N8V2 638 aaPredicted RBP9.58□□□□□ -0.88
TOP1-201ENST00000361337 SLC7A6OSQ96CW6 309 aaPredicted RBP9.58□□□□□ -0.88
TOP1-201ENST00000361337 CDHR1Q96JP9 859 aa9.58□□□□□ -0.88
TOP1-201ENST00000361337 POLR3FQ9H1D9 316 aaPredicted RBP9.58□□□□□ -0.88
TOP1-201ENST00000361337 RANBP17Q9H2T7 1088 aaKnown RBP9.58□□□□□ -0.88
TOP1-201ENST00000361337 C12orf65Q9H3J6 166 aaKnown RBP9.58□□□□□ -0.88
TOP1-201ENST00000361337 CORO1CQ9ULV4 474 aaPredicted RBP9.58□□□□□ -0.88
TOP1-201ENST00000361337 A6NHS1 94 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms