RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 KMT2BQ9UMN6 2715 aaPredicted RBP16.26■□□□□ 0.19
GDPD3-201ENST00000360688 CYB561D2O14569 222 aa16.26■□□□□ 0.19
GDPD3-201ENST00000360688 TBCAO75347 108 aaKnown RBP16.26■□□□□ 0.19
GDPD3-201ENST00000360688 CD2BP2O95400 341 aaKnown RBP16.26■□□□□ 0.19
GDPD3-201ENST00000360688 CDC25CP30307 473 aa16.26■□□□□ 0.19
GDPD3-201ENST00000360688 ABCD1P33897 745 aa16.26■□□□□ 0.19
GDPD3-201ENST00000360688 CNR2P34972 360 aa16.26■□□□□ 0.19
GDPD3-201ENST00000360688 HEATR6Q6AI08 1181 aaKnown RBP16.26■□□□□ 0.19
GDPD3-201ENST00000360688 LRRTM3Q86VH5 581 aa16.26■□□□□ 0.19
GDPD3-201ENST00000360688 METTL23Q86XA0 190 aa16.26■□□□□ 0.19
GDPD3-201ENST00000360688 SLC46A2Q9BY10 475 aa16.26■□□□□ 0.19
GDPD3-201ENST00000360688 CCSER1Q9C0I3 900 aa16.26■□□□□ 0.19
GDPD3-201ENST00000360688 ST6GALNAC4Q9H4F1 302 aa16.26■□□□□ 0.19
GDPD3-201ENST00000360688 SEMA4GQ9NTN9 838 aa16.26■□□□□ 0.19
GDPD3-201ENST00000360688 DPP3Q9NY33 737 aa16.26■□□□□ 0.19
GDPD3-201ENST00000360688 STYXL1Q9Y6J8 313 aa16.26■□□□□ 0.19
GDPD3-201ENST00000360688 HOXC13P31276 330 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 LONP1P36776 959 aaKnown RBP16.25■□□□□ 0.19
GDPD3-201ENST00000360688 TAF6P49848 677 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 PLCB2Q00722 1185 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 WSCD1Q658N2 575 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 SLFN12LQ6IEE8 588 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 THEM5Q8N1Q8 247 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 SYNPOQ8N3V7 929 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 RASSF8Q8NHQ8 419 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 SPPL2BQ8TCT7 592 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 GIPC2Q8TF65 315 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 C2orf15Q8WU43 125 aaKnown RBP16.25■□□□□ 0.19
GDPD3-201ENST00000360688 LARP4BQ92615 738 aaKnown RBP16.25■□□□□ 0.19
GDPD3-201ENST00000360688 CNTNAP3BQ96NU0 1288 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 GCNAQ96QF7 691 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 PYM1Q9BRP8 204 aaKnown RBP16.25■□□□□ 0.19
GDPD3-201ENST00000360688 CNTNAP3Q9BZ76 1288 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 SMG9Q9H0W8 520 aaKnown RBP16.25■□□□□ 0.19
GDPD3-201ENST00000360688 IKZF4Q9H2S9 585 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 UPF2Q9HAU5 1272 aaKnown RBP16.25■□□□□ 0.19
GDPD3-201ENST00000360688 AGO2Q9UKV8 859 aaKnown RBP16.25■□□□□ 0.19
GDPD3-201ENST00000360688 GREB1Q4ZG55 1949 aa16.25■□□□□ 0.19
GDPD3-201ENST00000360688 CNOT1A5YKK6 2376 aaKnown RBP16.25■□□□□ 0.19
GDPD3-201ENST00000360688 BMP15O95972 392 aa16.24■□□□□ 0.19
GDPD3-201ENST00000360688 HAPLN1P10915 354 aaPredicted RBP16.24■□□□□ 0.19
GDPD3-201ENST00000360688 HOXA6P31267 233 aa16.24■□□□□ 0.19
GDPD3-201ENST00000360688 MCM2P49736 904 aa16.24■□□□□ 0.19
GDPD3-201ENST00000360688 SMARCB1Q12824 385 aa16.24■□□□□ 0.19
GDPD3-201ENST00000360688 ITPRIPL2Q3MIP1 535 aa16.24■□□□□ 0.19
GDPD3-201ENST00000360688 CRELD2Q6UXH1 353 aaPredicted RBP16.24■□□□□ 0.19
GDPD3-201ENST00000360688 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.24■□□□□ 0.19
GDPD3-201ENST00000360688 EFCAB13Q8IY85 973 aa16.24■□□□□ 0.19
GDPD3-201ENST00000360688 NETO1Q8TDF5 533 aa16.24■□□□□ 0.19
GDPD3-201ENST00000360688 GKN1Q9NS71 199 aa16.24■□□□□ 0.19
GDPD3-201ENST00000360688 THG1LQ9NWX6 298 aaKnown RBP16.24■□□□□ 0.19
GDPD3-201ENST00000360688 LAMA1P25391 3075 aa16.24■□□□□ 0.19
GDPD3-201ENST00000360688 EML5Q05BV3 1969 aa16.24■□□□□ 0.19
GDPD3-201ENST00000360688 CHD8Q9HCK8 2581 aa16.24■□□□□ 0.19
GDPD3-201ENST00000360688 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.23■□□□□ 0.19
GDPD3-201ENST00000360688 KPNA7A9QM74 516 aa16.23■□□□□ 0.19
GDPD3-201ENST00000360688 SLC30A4O14863 429 aa16.23■□□□□ 0.19
GDPD3-201ENST00000360688 DDIT3P35638 169 aa16.23■□□□□ 0.19
GDPD3-201ENST00000360688 POU5F1Q01860 360 aaKnown RBP16.23■□□□□ 0.19
GDPD3-201ENST00000360688 TAF12Q16514 161 aa16.23■□□□□ 0.19
GDPD3-201ENST00000360688 CSRP2Q16527 193 aa16.23■□□□□ 0.19
GDPD3-201ENST00000360688 LARP1BQ659C4 914 aaKnown RBP16.23■□□□□ 0.19
GDPD3-201ENST00000360688 PRR23CQ6ZRP0 262 aa16.23■□□□□ 0.19
GDPD3-201ENST00000360688 TMEM150AQ86TG1 271 aa16.23■□□□□ 0.19
GDPD3-201ENST00000360688 WDR5BQ86VZ2 330 aa16.23■□□□□ 0.19
GDPD3-201ENST00000360688 CMTM8Q8IZV2 173 aa16.23■□□□□ 0.19
GDPD3-201ENST00000360688 FAM83CQ9BQN1 747 aa16.23■□□□□ 0.19
GDPD3-201ENST00000360688 TMLHEQ9NVH6 421 aa16.23■□□□□ 0.19
GDPD3-201ENST00000360688 ABI2Q9NYB9 513 aaPredicted RBP16.23■□□□□ 0.19
GDPD3-201ENST00000360688 ZMYM5Q9UJ78 669 aa16.23■□□□□ 0.19
GDPD3-201ENST00000360688 SMC3Q9UQE7 1217 aa16.23■□□□□ 0.19
GDPD3-201ENST00000360688 F11P03951 625 aa16.22■□□□□ 0.19
GDPD3-201ENST00000360688 HMGA1P17096 107 aaKnown RBP16.22■□□□□ 0.19
GDPD3-201ENST00000360688 ADSSP30520 456 aa16.22■□□□□ 0.19
GDPD3-201ENST00000360688 NLRP12P59046 1061 aa16.22■□□□□ 0.19
GDPD3-201ENST00000360688 SF3A1Q15459 793 aaKnown RBP16.22■□□□□ 0.19
GDPD3-201ENST00000360688 SV2CQ496J9 727 aa16.22■□□□□ 0.19
GDPD3-201ENST00000360688 PKN3Q6P5Z2 889 aa16.22■□□□□ 0.19
GDPD3-201ENST00000360688 USP49Q70CQ1 688 aa16.22■□□□□ 0.19
GDPD3-201ENST00000360688 CEP68Q76N32 757 aa16.22■□□□□ 0.19
GDPD3-201ENST00000360688 ZNF720Q7Z2F6 126 aa16.22■□□□□ 0.19
GDPD3-201ENST00000360688 SFR1Q86XK3 245 aa16.22■□□□□ 0.19
GDPD3-201ENST00000360688 DCP1BQ8IZD4 617 aaKnown RBP16.22■□□□□ 0.19
GDPD3-201ENST00000360688 FAM160A2Q8N612 972 aaPredicted RBP16.22■□□□□ 0.19
GDPD3-201ENST00000360688 KRI1Q8N9T8 703 aaKnown RBP16.22■□□□□ 0.19
GDPD3-201ENST00000360688 POMGNT1Q8WZA1 660 aa16.22■□□□□ 0.19
GDPD3-201ENST00000360688 HPS4Q9NQG7 708 aa16.22■□□□□ 0.19
GDPD3-201ENST00000360688 CCL26Q9Y258 94 aa16.22■□□□□ 0.19
GDPD3-201ENST00000360688 PCDHB5Q9Y5E4 795 aa16.22■□□□□ 0.19
GDPD3-201ENST00000360688 MAP1BP46821 2468 aaKnown RBP16.21■□□□□ 0.19
GDPD3-201ENST00000360688 EXTL3O43909 919 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 GDF9O60383 454 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 PPP1R37O75864 691 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 IL18RAPO95256 599 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 ADRB1P08588 477 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 AVPR1AP37288 418 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 RUNX3Q13761 415 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 PTPAQ15257 358 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 DYMQ7RTS9 669 aa16.21■□□□□ 0.19
GDPD3-201ENST00000360688 BRAPQ7Z569 592 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms