RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 RGPD4Q7Z3J3 1758 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 DHX15O43143 795 aaKnown RBP7.86□□□□□ -1.15
CLCN3-202ENST00000360642 KCNH1O95259 989 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 ECHS1P30084 290 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 NOP2P46087 812 aaKnown RBP7.86□□□□□ -1.15
CLCN3-202ENST00000360642 NEK2P51955 445 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 GALCP54803 685 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 RNASE9P60153 205 aaKnown RBP7.86□□□□□ -1.15
CLCN3-202ENST00000360642 TNNC1P63316 161 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 DRAP1Q14919 205 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-202ENST00000360642 TRADDQ15628 312 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 TTMPQ5BVD1 217 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 CD302Q8IX05 232 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 LMBR1Q8WVP7 490 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 GLIS2Q9BZE0 524 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-202ENST00000360642 MTFR1LQ9H019 292 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 CRTAC1Q9NQ79 661 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 FRMD4BQ9Y2L6 1034 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 NCANO14594 1321 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 TNS1Q9HBL0 1735 aaKnown RBP7.85□□□□□ -1.15
CLCN3-202ENST00000360642 H3BRJ5 948 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 HSF2BPO75031 334 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 HIP1RO75146 1068 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 ICAM1P05362 532 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 BAG6P46379 1132 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 PPATQ06203 517 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 DPY19L1Q2PZI1 675 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 EMC10Q5UCC4 262 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 NSMFQ6X4W1 530 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 NIPA1Q7RTP0 329 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 FAM83AQ86UY5 434 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 SYCE1Q8N0S2 351 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 RIN3Q8TB24 985 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 WHAMMQ8TF30 809 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 CLEC4DQ8WXI8 215 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 ARL8AQ96BM9 186 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 TMEM39BQ9GZU3 492 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 ISCUQ9H1K1 167 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 TRIM39Q9HCM9 518 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 COL20A1Q9P218 1284 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 PPP1R9AQ9ULJ8 1098 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 FAM50BQ9Y247 325 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-202ENST00000360642 ZNF233A6NK53 670 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 RAD17O75943 681 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 TMEM253P0C7T8 217 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 BFSP1Q12934 665 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 MIGA2Q7L4E1 593 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 PEX26Q7Z412 305 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 SRLQ86TD4 932 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 C1orf131Q8NDD1 294 aaKnown RBP7.85□□□□□ -1.15
CLCN3-202ENST00000360642 TTC8Q8TAM2 541 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 U2AF1L4Q8WU68 220 aaKnown RBP7.85□□□□□ -1.15
CLCN3-202ENST00000360642 IFT81Q8WYA0 676 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 ZBED3Q96IU2 234 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-202ENST00000360642 INTS2Q9H0H0 1204 aaKnown RBP7.85□□□□□ -1.15
CLCN3-202ENST00000360642 NOL6Q9H6R4 1146 aaKnown RBP7.85□□□□□ -1.15
CLCN3-202ENST00000360642 KCNH7Q9NS40 1196 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 TTC7AQ9ULT0 858 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-202ENST00000360642 AP4E1Q9UPM8 1137 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 COQ6Q9Y2Z9 468 aa7.85□□□□□ -1.15
CLCN3-202ENST00000360642 LOC100289279A0A1B0GTE1 492 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 LCHNA4D1U4 455 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 PGRMC1O00264 195 aaKnown RBP7.84□□□□□ -1.15
CLCN3-202ENST00000360642 SHOXO15266 292 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 PPFIA4O75335 1185 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 RGS9O75916 674 aaPredicted RBP7.84□□□□□ -1.15
CLCN3-202ENST00000360642 TRIM49P0CI25 452 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 TRIM49CP0CI26 452 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 PABPC1P11940 636 aaKnown RBP7.84□□□□□ -1.15
CLCN3-202ENST00000360642 SNRPBP14678 240 aaKnown RBP7.84□□□□□ -1.15
CLCN3-202ENST00000360642 HSPA9P38646 679 aaKnown RBP7.84□□□□□ -1.15
CLCN3-202ENST00000360642 CYP2J2P51589 502 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 IRAK1P51617 712 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 KIF22Q14807 665 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 PKDCCQ504Y2 493 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 PRAMEF13Q5VWM6 474 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 C12orf56Q8IXR9 622 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 TAF1DQ9H5J8 278 aaPredicted RBP7.84□□□□□ -1.15
CLCN3-202ENST00000360642 ZFYVE1Q9HBF4 777 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 C11orf16Q9NQ32 467 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 SLC5A4Q9NY91 659 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 H2AFY2Q9P0M6 372 aaPredicted RBP7.84□□□□□ -1.15
CLCN3-202ENST00000360642 LCMT1Q9UIC8 334 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 DBR1Q9UK59 544 aaKnown RBP7.84□□□□□ -1.15
CLCN3-202ENST00000360642 GPR55Q9Y2T6 319 aaPredicted RBP7.84□□□□□ -1.15
CLCN3-202ENST00000360642 NOC2LQ9Y3T9 749 aaKnown RBP7.84□□□□□ -1.15
CLCN3-202ENST00000360642 ARHGEF35A5YM69 484 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 VSTM5A8MXK1 200 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 CCDC188H7C350 402 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 FSCN2O14926 492 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 SART1O43290 800 aaKnown RBP7.84□□□□□ -1.15
CLCN3-202ENST00000360642 CEP104O60308 925 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 HEATR6Q6AI08 1181 aaKnown RBP7.84□□□□□ -1.15
CLCN3-202ENST00000360642 KCNT2Q6UVM3 1135 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 KLHL7Q8IXQ5 586 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 RTKN2Q8IZC4 609 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 SLC35G2Q8TBE7 412 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 RFFLQ8WZ73 363 aa7.84□□□□□ -1.15
CLCN3-202ENST00000360642 SEC14L1Q92503 715 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms