RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 TGFB1I1O43294 461 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 SNRPAP09012 282 aaKnown RBP17.12■□□□□ 0.33
SCAF1-201ENST00000360565 SCTRP47872 440 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 GEMIN4P57678 1058 aaKnown RBP17.12■□□□□ 0.33
SCAF1-201ENST00000360565 COG7P83436 770 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 AGGF1Q8N302 714 aaeCLIP17.12■□□□□ 0.33
SCAF1-201ENST00000360565 ZNF606Q8WXB4 792 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 CLMNQ96JQ2 1002 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 SPATS2LQ9NUQ6 558 aaKnown RBP17.12■□□□□ 0.33
SCAF1-201ENST00000360565 PCDHA3Q9Y5H8 950 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 NID2Q14112 1375 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 CCDC78A2IDD5 438 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 RIPK2O43353 540 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 CASP2P42575 452 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 NLRP11P59045 1033 aaKnown RBP17.11■□□□□ 0.33
SCAF1-201ENST00000360565 APTXQ7Z2E3 356 aaKnown RBP17.11■□□□□ 0.33
SCAF1-201ENST00000360565 LONP2Q86WA8 852 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 SAMD3Q8N6K7 520 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 ACTL9Q8TC94 416 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 SKA2Q8WVK7 121 aaPredicted RBP17.11■□□□□ 0.33
SCAF1-201ENST00000360565 TRIM56Q9BRZ2 755 aaKnown RBP17.11■□□□□ 0.33
SCAF1-201ENST00000360565 EFHD1Q9BUP0 239 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 DDX20Q9UHI6 824 aaKnown RBP17.11■□□□□ 0.33
SCAF1-201ENST00000360565 PPP1R12AO14974 1030 aaPredicted RBP17.11■□□□□ 0.33
SCAF1-201ENST00000360565 ALDH18A1P54886 795 aaKnown RBP17.11■□□□□ 0.33
SCAF1-201ENST00000360565 GCNT1Q02742 428 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 OVGP1Q12889 678 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 SLC12A1Q13621 1099 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 CRY2Q49AN0 593 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 OR6J1Q8NGC5 347 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 GLIS2Q9BZE0 524 aaPredicted RBP17.11■□□□□ 0.33
SCAF1-201ENST00000360565 CD248Q9HCU0 757 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 VCX3AQ9NNX9 186 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 GTSE1Q9NYZ3 720 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 CSDE1O75534 798 aaKnown RBP17.11■□□□□ 0.33
SCAF1-201ENST00000360565 SKOR1P84550 965 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 STX3Q13277 289 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 TRADDQ15628 312 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 RASSF3Q86WH2 238 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 NDUFAF2Q8N183 169 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 PIP4K2CQ8TBX8 421 aa17.11■□□□□ 0.33
SCAF1-201ENST00000360565 TRIM49D1C9J1S8 452 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 VWA5AO00534 786 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 GH1P01241 217 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 SNHG28P0DPA3 235 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 PAMP19021 973 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 PPATQ06203 517 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 PLCB4Q15147 1175 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 SPIRE2Q8WWL2 714 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 ZBTB45Q96K62 511 aaPredicted RBP17.1■□□□□ 0.33
SCAF1-201ENST00000360565 SLC25A27O95847 323 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 PGK2P07205 417 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 SULT1E1P49888 294 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 BOLA3Q53S33 107 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 ITPRIPL1Q6GPH6 555 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 ACAD11Q709F0 780 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 NIPA1Q7RTP0 329 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 MSL3Q8N5Y2 521 aaKnown RBP17.1■□□□□ 0.33
SCAF1-201ENST00000360565 DNAJC18Q9H819 358 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 AFDNP55196 1824 aaKnown RBP17.1■□□□□ 0.33
SCAF1-201ENST00000360565 CALCAP01258 141 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 STIP1P31948 543 aaKnown RBP17.1■□□□□ 0.33
SCAF1-201ENST00000360565 HGSNATQ68CP4 663 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 APPL2Q8NEU8 664 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 SPAG6O75602 509 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 TPI1P60174 286 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 KIF22Q14807 665 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 HYIQ5T013 277 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 MROH9Q5TGP6 573 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 SPOCD1Q6ZMY3 1216 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 LRRC6Q86X45 466 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 MAP4K3Q8IVH8 894 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 MRIQ9BWK5 157 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 OSBPL1AQ9BXW6 950 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 NAALADL1Q9UQQ1 740 aa17.1■□□□□ 0.33
SCAF1-201ENST00000360565 SMAPO00193 183 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 PIK3CDO00329 1044 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 ITGB5P18084 799 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 GOLGA7BQ2TAP0 167 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 RGS9BPQ6ZS82 235 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 SLC26A7Q8TE54 656 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 CHST7Q9NS84 486 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 PHTF1Q9UMS5 762 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 GAS2O43903 313 aaKnown RBP17.09■□□□□ 0.33
SCAF1-201ENST00000360565 GJB6O95452 261 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 MARCKSL1P49006 195 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 MCL1Q07820 350 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 RNF135Q8IUD6 432 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 FBXO36Q8NEA4 188 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 OR6P1Q8NGX9 317 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 SPDL1Q96EA4 605 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 FAM111AQ96PZ2 611 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 DCLK3Q9C098 648 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 YIPF3Q9GZM5 350 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 MANSC1Q9H8J5 431 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 NOD2Q9HC29 1040 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 TAC1P20366 129 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 DCAF6Q58WW2 860 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 FOXR2Q6PJQ5 311 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 DEFB132Q7Z7B7 95 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms