RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 SNX13Q9Y5W8 968 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 SLC16A3O15427 465 aaKnown RBP9.67□□□□□ -0.86
VPS13A-203ENST00000360280 DARSP14868 501 aaKnown RBP9.67□□□□□ -0.86
VPS13A-203ENST00000360280 CDC25AP30304 524 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 ADD2P35612 726 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 PTRHD1Q6GMV3 140 aaKnown RBP9.67□□□□□ -0.86
VPS13A-203ENST00000360280 C18orf8Q96DM3 657 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 TRIM49BA6NDI0 452 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 STK25O00506 426 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 ST8SIA6P61647 398 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 C4orf33Q8N1A6 199 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 NMD3Q96D46 503 aaKnown RBP9.67□□□□□ -0.86
VPS13A-203ENST00000360280 ARMC7Q9H6L4 198 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 COPRSQ9NQ92 184 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 PHKA1P46020 1223 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 TRMT5Q32P41 509 aaKnown RBP9.67□□□□□ -0.86
VPS13A-203ENST00000360280 SCUBE1Q8IWY4 988 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 ZNF333Q96JL9 665 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 TRIM43BA6NCK2 446 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 IL13P35225 146 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 PRCPP42785 496 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 DCAF4Q8WV16 495 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 SERPINB12Q96P63 405 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 FAM213AQ9BRX8 229 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 NCKAP5LQ9HCH0 1330 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 WDR62O43379 1518 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 F8W810 466 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 GOLPH3Q9H4A6 298 aa9.67□□□□□ -0.86
VPS13A-203ENST00000360280 ZCCHC17Q9NP64 241 aaKnown RBP9.67□□□□□ -0.86
VPS13A-203ENST00000360280 PVALEFA0A1B0GWK0 134 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 PPEF1O14829 653 aaPredicted RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 TM9SF1O15321 606 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 KCNT1Q5JUK3 1230 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 AGAP9Q5VTM2 703 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 TYW3Q6IPR3 259 aaKnown RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 SLC10A4Q96EP9 437 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 UBE2OQ9C0C9 1292 aaKnown RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 PIDD1Q9HB75 910 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 EMSYQ7Z589 1322 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 STX11O75558 287 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 GUCY1A2P33402 732 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 IREB2P48200 963 aaKnown RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 RCAN1P53805 252 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 PID1Q7Z2X4 250 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 THNSL1Q8IYQ7 743 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 C1orf50Q9BV19 199 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 CYP39A1Q9NYL5 469 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 SH3BP4Q9P0V3 963 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 PDS5AQ29RF7 1337 aaKnown RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 FKBP6O75344 327 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 IFNA14P01570 189 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 ATP6V1B2P21281 511 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 BCAP31P51572 246 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 CENPCQ03188 943 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 RDM1Q8NG50 284 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 SPASTQ9UBP0 616 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 LSM7Q9UK45 103 aaKnown RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 SLC30A1Q9Y6M5 507 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 UBE2SQ16763 222 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 PRMT9Q6P2P2 845 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 SH2D3CQ8N5H7 860 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 TUBA8Q9NY65 449 aaPredicted RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 PAK5Q9P286 719 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 FAM58BPP0C7Q3 252 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 ALOX15P16050 662 aaPredicted RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 KIF2BQ8N4N8 673 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 SPATA18Q8TC71 538 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 MAGEB18Q96M61 343 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 V9GYQ6 96 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 SOAT2O75908 522 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 EIF4A1P60842 406 aaKnown RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 FAM49AQ9H0Q0 323 aaPredicted RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 SLITRK2Q9H156 845 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 RSAD1Q9HA92 442 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 FAM220BPB1ANY3 271 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 VWA5AO00534 786 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 TRAPPC3O43617 180 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 MYL12AP19105 171 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 FEN1P39748 380 aaKnown RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 TWF1Q12792 350 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 VEPH1Q14D04 833 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 CLEC16AQ2KHT3 1053 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 OTOAQ7RTW8 1153 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 SPON2Q9BUD6 331 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 TIPINQ9BVW5 301 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 FAM192AQ9GZU8 254 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 TMA7Q9Y2S6 64 aaKnown RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 VIRMAQ69YN4 1812 aaKnown RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 WDR19Q8NEZ3 1342 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 C2CD6Q53TS8 623 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 PCNX4Q63HM2 1172 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 C3orf62Q6ZUJ4 267 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 E2F7Q96AV8 911 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 MED15Q96RN5 788 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 MUC3BQ9H195 1237 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 TRIM66O15016 1216 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 KIAA0391O15091 583 aaKnown RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 OTUD4Q01804 1114 aaKnown RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 ZNF746Q6NUN9 644 aaPredicted RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 AGPAT1Q99943 283 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms