RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 MFSD4BQ5TF39 518 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 ADSSL1Q8N142 457 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 BHMTQ93088 406 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 NSUN4Q96CB9 384 aaKnown RBP19.15■□□□□ 0.66
SHANK1-202ENST00000359082 CCT7Q99832 543 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 KCNF1Q9H3M0 494 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 MTMR4Q9NYA4 1195 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 HARS2P49590 506 aaKnown RBP19.15■□□□□ 0.66
SHANK1-202ENST00000359082 POU4F1Q01851 419 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 TMEM106CQ9BVX2 250 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 SPASTQ9UBP0 616 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 CDH16O75309 829 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 ZNF543Q08ER8 600 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 CCDC60Q8IWA6 550 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-202ENST00000359082 C10orf53Q8N6V4 93 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 TMEM245Q9H330 911 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 UBXN8O00124 270 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 NBNO60934 754 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 SNRPAP09012 282 aaKnown RBP19.15■□□□□ 0.66
SHANK1-202ENST00000359082 SEMA3FQ13275 785 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 TRIP4Q15650 581 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-202ENST00000359082 MAPRE1Q15691 268 aaKnown RBP19.15■□□□□ 0.66
SHANK1-202ENST00000359082 AGBL2Q5U5Z8 902 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 ALDH8A1Q9H2A2 487 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-202ENST00000359082 RIC8BQ9NVN3 520 aa19.15■□□□□ 0.66
SHANK1-202ENST00000359082 NRKQ7Z2Y5 1582 aa19.14■□□□□ 0.66
SHANK1-202ENST00000359082 ACADSBP45954 432 aa19.14■□□□□ 0.66
SHANK1-202ENST00000359082 PLIN5Q00G26 463 aa19.14■□□□□ 0.66
SHANK1-202ENST00000359082 SCFD2Q8WU76 684 aa19.14■□□□□ 0.66
SHANK1-202ENST00000359082 CNDP1Q96KN2 507 aa19.14■□□□□ 0.66
SHANK1-202ENST00000359082 LOC102724159A0A0B4J2E5 919 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 HEATR9A2RTY3 570 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 PWP2Q15269 919 aaKnown RBP19.14■□□□□ 0.65
SHANK1-202ENST00000359082 AMHR2Q16671 573 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 USP6NLQ92738 828 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 C2CD2LO14523 706 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 CYP2B6P20813 491 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 TRPM8Q7Z2W7 1104 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 MIER2Q8N344 545 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 TBC1D23Q9NUY8 699 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 NCF1BA6NI72 391 aaPredicted RBP19.14■□□□□ 0.65
SHANK1-202ENST00000359082 NCF1CA8MVU1 366 aaPredicted RBP19.14■□□□□ 0.65
SHANK1-202ENST00000359082 NCF1P14598 390 aaPredicted RBP19.14■□□□□ 0.65
SHANK1-202ENST00000359082 CLK1P49759 484 aaKnown RBP19.14■□□□□ 0.65
SHANK1-202ENST00000359082 TAF1CQ15572 869 aaPredicted RBP19.14■□□□□ 0.65
SHANK1-202ENST00000359082 SDE2Q6IQ49 451 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 SRLQ86TD4 932 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 DCP1BQ8IZD4 617 aaKnown RBP19.14■□□□□ 0.65
SHANK1-202ENST00000359082 RIN2Q8WYP3 895 aaPredicted RBP19.14■□□□□ 0.65
SHANK1-202ENST00000359082 L3MBTL3Q96JM7 780 aaPredicted RBP19.14■□□□□ 0.65
SHANK1-202ENST00000359082 OSBPL8Q9BZF1 889 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 NAGPAQ9UK23 515 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 RNF103O00237 685 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 EXTL3O43909 919 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 PTK6Q13882 451 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 RIN3Q8TB24 985 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 TFB1MQ8WVM0 346 aaKnown RBP19.14■□□□□ 0.65
SHANK1-202ENST00000359082 GFM2Q969S9 779 aaKnown RBP19.14■□□□□ 0.65
SHANK1-202ENST00000359082 E2F7Q96AV8 911 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 SLC38A7Q9NVC3 462 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 WWOXQ9NZC7 414 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 NFKBIL1Q9UBC1 381 aaPredicted RBP19.14■□□□□ 0.65
SHANK1-202ENST00000359082 ITIH6Q6UXX5 1313 aa19.14■□□□□ 0.65
SHANK1-202ENST00000359082 TP53BP2Q13625 1128 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 DENND5BQ6ZUT9 1274 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 RASGRP2Q7LDG7 609 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 SEPT1Q8WYJ6 367 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 LOC100653049A0A140TA62 436 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 CST8O60676 142 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 KRT34O76011 436 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 PRKCQQ04759 706 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 GOLPH3Q9H4A6 298 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 SCAF8Q9UPN6 1271 aaKnown RBP19.13■□□□□ 0.65
SHANK1-202ENST00000359082 DAGLAQ9Y4D2 1042 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 TNS3Q68CZ2 1445 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 M0R3G1 203 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 TRAF7Q6Q0C0 670 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 CHSY1Q86X52 802 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 PPP1R2P1Q96PQ5 205 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 PRPF18Q99633 342 aaKnown RBP19.13■□□□□ 0.65
SHANK1-202ENST00000359082 RSAD1Q9HA92 442 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 CRLS1Q9UJA2 301 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 GRID1Q9ULK0 1009 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 RSPH10B2B2RC85 870 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 RSPH10BP0C881 870 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 RFC5P40937 340 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 TRIM69Q86WT6 500 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 SGF29Q96ES7 293 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 ISCA1Q9BUE6 129 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 NUMBP49757 651 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 CCNI2Q6ZMN8 369 aaPredicted RBP19.13■□□□□ 0.65
SHANK1-202ENST00000359082 DTNBP1Q96EV8 351 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 MOV10L1Q9BXT6 1211 aaKnown RBP19.13■□□□□ 0.65
SHANK1-202ENST00000359082 TMEM8AQ9HCN3 771 aa19.13■□□□□ 0.65
SHANK1-202ENST00000359082 ALDH1A3P47895 512 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 RFX3P48380 749 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 KYNUQ16719 465 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 HIST2H2ACQ16777 129 aaPredicted RBP19.12■□□□□ 0.65
SHANK1-202ENST00000359082 HIST2H2AA3Q6FI13 130 aa19.12■□□□□ 0.65
SHANK1-202ENST00000359082 ZNF280CQ8ND82 737 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms