RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 KLHL2O95198 593 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 MYCP01106 439 aaPredicted RBP14.34□□□□□ -0.11
VCP-201ENST00000358901 SPRP35270 261 aaPredicted RBP14.34□□□□□ -0.11
VCP-201ENST00000358901 CAPRIN1Q14444 709 aaKnown RBP14.34□□□□□ -0.11
VCP-201ENST00000358901 ITIH4Q14624 930 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 MAPRE2Q15555 327 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 IER5Q5VY09 327 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 PARD3BQ8TEW8 1205 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 E5RI56 91 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 BOLA3Q53S33 107 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 DCAF6Q58WW2 860 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 TMC3Q7Z5M5 1100 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 IFNEQ86WN2 208 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 RBM46Q8TBY0 533 aaKnown RBP14.34□□□□□ -0.11
VCP-201ENST00000358901 ZNF669Q96BR6 464 aaPredicted RBP14.34□□□□□ -0.11
VCP-201ENST00000358901 HPDLQ96IR7 371 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 TMEM121Q9BTD3 319 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 HACD3Q9P035 362 aa14.34□□□□□ -0.11
VCP-201ENST00000358901 ANP32DO95626 131 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 TCN1P20061 433 aaPredicted RBP14.33□□□□□ -0.12
VCP-201ENST00000358901 IMPG1Q17R60 797 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 FBXO36Q8NEA4 188 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 CMTM5Q96DZ9 223 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 PROSCO94903 275 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 NLRP11P59045 1033 aaKnown RBP14.33□□□□□ -0.12
VCP-201ENST00000358901 OTUD4Q01804 1114 aaKnown RBP14.33□□□□□ -0.12
VCP-201ENST00000358901 UGP2Q16851 508 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 TTC39BQ5VTQ0 682 aaPredicted RBP14.33□□□□□ -0.12
VCP-201ENST00000358901 XRRA1Q6P2D8 792 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 SLC30A9Q6PML9 568 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 APPL2Q8NEU8 664 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 ZNF507Q8TCN5 953 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 PTPRN2Q92932 1015 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 EME1Q96AY2 570 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 MTMR12Q9C0I1 747 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 SIK3Q9Y2K2 1263 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 SNX5Q9Y5X3 404 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 PJA2O43164 708 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 SEC24DO94855 1032 aaPredicted RBP14.33□□□□□ -0.12
VCP-201ENST00000358901 ITGB3P05106 788 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 POLBP06746 335 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 ARHGDIAP52565 204 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 EFCAB12Q6NXP0 572 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 WDR59Q6PJI9 974 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 RDM1Q8NG50 284 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 RMDN1Q96DB5 314 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 ZDHHC15Q96MV8 337 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 MED15Q96RN5 788 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 EGFL8Q99944 293 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 PRDM4Q9UKN5 801 aa14.33□□□□□ -0.12
VCP-201ENST00000358901 EPHB6O15197 1021 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 Q4G0T1 1027 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 TFDP3Q5H9I0 405 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 GMCL1Q96IK5 515 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 DEFB129Q9H1M3 183 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 ELP3Q9H9T3 547 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 C20orf96Q9NUD7 363 aaPredicted RBP14.32□□□□□ -0.12
VCP-201ENST00000358901 RCCD1A6NED2 376 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 FAM86B1E9PN63 330 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 NFIBO00712 420 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 FAM86B2P0C5J1 330 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 UBTFL6P0CB48 400 aaPredicted RBP14.32□□□□□ -0.12
VCP-201ENST00000358901 PYGMP11217 842 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 IL10P22301 178 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 HADHAP40939 763 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 IFI35P80217 286 aaPredicted RBP14.32□□□□□ -0.12
VCP-201ENST00000358901 MRPS35P82673 323 aaKnown RBP14.32□□□□□ -0.12
VCP-201ENST00000358901 RCN1Q15293 331 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 TMEM119Q4V9L6 283 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 NT5DC3Q86UY8 548 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 ELMO3Q96BJ8 720 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 GPRASP2Q96D09 838 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 BEGAINQ9BUH8 593 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 OLA1Q9NTK5 396 aaKnown RBP14.32□□□□□ -0.12
VCP-201ENST00000358901 PRMT7Q9NVM4 692 aaPredicted RBP14.32□□□□□ -0.12
VCP-201ENST00000358901 OGTO15294 1046 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 KCNA2P16389 499 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 OCA2Q04671 838 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 ZNF235Q14590 738 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 ACTL9Q8TC94 416 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 TATDN2Q93075 761 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 MAGEB18Q96M61 343 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 NAALADL1Q9UQQ1 740 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 SPATA31A5Q5VU36 1347 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 SPATA31A7Q8IWB4 1347 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 NWD1Q149M9 1564 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 IL18RAPO95256 599 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 MUTP22033 750 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 CAP2P40123 477 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 ANGEL2Q5VTE6 544 aaKnown RBP14.32□□□□□ -0.12
VCP-201ENST00000358901 GRAMD4Q6IC98 578 aa14.32□□□□□ -0.12
VCP-201ENST00000358901 MRPL1Q9BYD6 325 aaKnown RBP14.32□□□□□ -0.12
VCP-201ENST00000358901 AGLP35573 1532 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.31□□□□□ -0.12
VCP-201ENST00000358901 EEF2KO00418 725 aaKnown RBP14.31□□□□□ -0.12
VCP-201ENST00000358901 MAGEB2O15479 319 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 DGKIO75912 1065 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 SHMT1P34896 483 aa14.31□□□□□ -0.12
VCP-201ENST00000358901 RPL21P46778 160 aaKnown RBP14.31□□□□□ -0.12
VCP-201ENST00000358901 PDK1Q15118 436 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms