RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PABPC3Q9H361 631 aaKnown RBP9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 CLK4Q9HAZ1 481 aaKnown RBP9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 PLAGL2Q9UPG8 496 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 AGTPBP1Q9UPW5 1226 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 UTP11Q9Y3A2 253 aaKnown RBP9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 SRPRBQ9Y5M8 271 aaKnown RBP9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 PLXNA1Q9UIW2 1896 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 CCDC194A0A1B0GVG4 234 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 FAM47E-STBD1D6RA91 191 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 TNFRSF10AO00220 468 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 PEX10O60683 326 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 PPP1R11O60927 126 aaPredicted RBP9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 FUCA1P04066 466 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 UBL4AP11441 157 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 PTPRAP18433 802 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 HOXA7P31268 230 aaPredicted RBP9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 STT3AP46977 705 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 ERFP50548 548 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 DNM2P50570 870 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 KPNA1P52294 538 aaPredicted RBP9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 GRM1Q13255 1194 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 TAF1CQ15572 869 aaPredicted RBP9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 ACAD11Q709F0 780 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 TRMT1LQ7Z2T5 733 aaKnown RBP9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 BLIDQ8IZY5 108 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 EGLN2Q96KS0 407 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 LRRC37BQ96QE4 947 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 WRNIP1Q96S55 665 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 FMO2Q99518 471 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 TRIM51Q9BSJ1 452 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 MAK16Q9BXY0 300 aaKnown RBP9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 ZMYND12Q9H0C1 365 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 COQ6Q9Y2Z9 468 aa9.81□□□□□ -0.84
SMARCAL1-202ENST00000358207 TRIM75PA6NK02 468 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 DKC1O60832 514 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 NDUFB10O96000 172 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 CRABP2P29373 138 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 HOXA13P31271 388 aaPredicted RBP9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 HNRNPH3P31942 346 aaKnown RBP9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 SYCP2LQ5T4T6 812 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 GPR153Q6NV75 609 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 ELMSAN1Q6PJG2 1045 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 UNC13DQ70J99 1090 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 PPP4R1Q8TF05 950 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 GOLPH3Q9H4A6 298 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 HOMER2Q9NSB8 354 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 MRGBPQ9NV56 204 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 NDUFA13Q9P0J0 144 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 CEP72Q9P209 647 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 CCDC160A6NGH7 325 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 SPECC1L-ADORA2AF8WAN1 911 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 KCNK3O14649 394 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 AMPD1P23109 780 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 FOXN2P32314 431 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 PTPROQ16827 1216 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 ZNF423Q2M1K9 1284 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 ASTE1Q2TB18 679 aaPredicted RBP9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 NADK2Q4G0N4 442 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 TTC38Q5R3I4 469 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 FAM83BQ5T0W9 1011 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 C6orf118Q5T5N4 469 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 RFX8Q6ZV50 586 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 FAM20CQ8IXL6 584 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 CPXCR1Q8N123 301 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 TTC39CQ8N584 583 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 SEMA4AQ9H3S1 761 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 JMJD4Q9H9V9 463 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 ZDHHC18Q9NUE0 388 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 AIPL1Q9NZN9 384 aa9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 CTDP1Q9Y5B0 961 aaPredicted RBP9.8□□□□□ -0.84
SMARCAL1-202ENST00000358207 CCDC162PA2VCL2 907 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 ANKRD34BA5PLL1 514 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 KLRC1P26715 233 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 BCAP31P51572 246 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 PPP2R5BQ15173 497 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 DENND2CQ68D51 928 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 ISLR2Q6UXK2 745 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 NEK10Q6ZWH5 1172 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 ESX1Q8N693 406 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 ACTRT1Q8TDG2 376 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 TMEM60Q9H2L4 133 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 TEX28O15482 410 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 CCNT1O60563 726 aaKnown RBP9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 EXOC3O60645 756 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 USP1O94782 785 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 PABPC1P11940 636 aaKnown RBP9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 CPA3P15088 417 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 TAC1P20366 129 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 EIF2B2P49770 351 aaKnown RBP9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 ENTPD1P49961 510 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 SOX10P56693 466 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 ZNF543Q08ER8 600 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 CRY1Q16526 586 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 FAM110CQ1W6H9 321 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 SPDYCQ5MJ68 293 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 PHLDB2Q86SQ0 1253 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 ITPKCQ96DU7 683 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 VPS50Q96JG6 964 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 COX4I2Q96KJ9 171 aa9.79□□□□□ -0.84
SMARCAL1-202ENST00000358207 PCMTD1Q96MG8 357 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms