RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 DHRS4Q9BTZ2 278 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 TBC1D10AQ9BXI6 508 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 VPS11Q9H270 941 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 GABBR1Q9UBS5 961 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 HAO1Q9UJM8 370 aa18.66■□□□□ 0.58
RTN4-204ENST00000357732 FARP1Q9Y4F1 1045 aaPredicted RBP18.66■□□□□ 0.58
RTN4-204ENST00000357732 TESPA1A2RU30 521 aaPredicted RBP18.65■□□□□ 0.58
RTN4-204ENST00000357732 T-ENOLP0DO92 83 aa18.65■□□□□ 0.58
RTN4-204ENST00000357732 DAB2IPQ5VWQ8 1189 aa18.65■□□□□ 0.58
RTN4-204ENST00000357732 PHLDB2Q86SQ0 1253 aa18.65■□□□□ 0.58
RTN4-204ENST00000357732 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.65■□□□□ 0.581e-6■■■■■ 116
RTN4-204ENST00000357732 FAM118BQ9BPY3 351 aa18.65■□□□□ 0.58
RTN4-204ENST00000357732 SLCO1B3Q9NPD5 702 aa18.65■□□□□ 0.58
RTN4-204ENST00000357732 XPNPEP1Q9NQW7 623 aa18.65■□□□□ 0.58
RTN4-204ENST00000357732 CYP26B1Q9NR63 512 aa18.65■□□□□ 0.58
RTN4-204ENST00000357732 ANKFY1Q9P2R3 1169 aa18.65■□□□□ 0.58
RTN4-204ENST00000357732 GRID1Q9ULK0 1009 aa18.65■□□□□ 0.58
RTN4-204ENST00000357732 SIP14410 1827 aa18.65■□□□□ 0.58
RTN4-204ENST00000357732 ZNF862O60290 1169 aa18.64■□□□□ 0.58
RTN4-204ENST00000357732 TPBGLP0DKB5 382 aa18.64■□□□□ 0.58
RTN4-204ENST00000357732 ATF7P17544 494 aaPredicted RBP18.64■□□□□ 0.58
RTN4-204ENST00000357732 PAX7P23759 505 aa18.64■□□□□ 0.58
RTN4-204ENST00000357732 C2CD6Q53TS8 623 aa18.64■□□□□ 0.58
RTN4-204ENST00000357732 ADGRD1Q6QNK2 874 aa18.64■□□□□ 0.58
RTN4-204ENST00000357732 PRUNE1Q86TP1 453 aa18.64■□□□□ 0.58
RTN4-204ENST00000357732 VSIG10LQ86VR7 867 aa18.64■□□□□ 0.58
RTN4-204ENST00000357732 SLC35B2Q8TB61 432 aa18.64■□□□□ 0.58
RTN4-204ENST00000357732 CDHR1Q96JP9 859 aa18.64■□□□□ 0.58
RTN4-204ENST00000357732 ZFP69BQ9UJL9 534 aa18.64■□□□□ 0.58
RTN4-204ENST00000357732 TCRBV5S1A1TA0A578 114 aa18.64■□□□□ 0.57
RTN4-204ENST00000357732 GJC1P36383 396 aa18.64■□□□□ 0.57
RTN4-204ENST00000357732 ARL4CP56559 192 aa18.64■□□□□ 0.57
RTN4-204ENST00000357732 SOX10P56693 466 aa18.64■□□□□ 0.57
RTN4-204ENST00000357732 NOP14P78316 857 aaKnown RBP18.64■□□□□ 0.57
RTN4-204ENST00000357732 PDIA2Q13087 525 aaKnown RBP18.64■□□□□ 0.57
RTN4-204ENST00000357732 SLC1A5Q15758 541 aa18.64■□□□□ 0.57
RTN4-204ENST00000357732 CAPRIN2Q6IMN6 1127 aaKnown RBP18.64■□□□□ 0.57
RTN4-204ENST00000357732 LVRNQ6Q4G3 990 aa18.64■□□□□ 0.57
RTN4-204ENST00000357732 OTOAQ7RTW8 1153 aa18.64■□□□□ 0.57
RTN4-204ENST00000357732 PASD1Q8IV76 773 aa18.64■□□□□ 0.57
RTN4-204ENST00000357732 PPIL6Q8IXY8 311 aa18.64■□□□□ 0.57
RTN4-204ENST00000357732 GLIS1Q8NBF1 620 aa18.64■□□□□ 0.57
RTN4-204ENST00000357732 POLR3FQ9H1D9 316 aaPredicted RBP18.64■□□□□ 0.57
RTN4-204ENST00000357732 APOBEC3GQ9HC16 384 aaKnown RBP18.64■□□□□ 0.57
RTN4-204ENST00000357732 ZNF277Q9NRM2 450 aaPredicted RBP18.64■□□□□ 0.57
RTN4-204ENST00000357732 PGAP2Q9UHJ9 254 aa18.64■□□□□ 0.57
RTN4-204ENST00000357732 COL4A5P29400 1685 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 KRT10P13645 584 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 CDKN2BP42772 138 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 IRX1P78414 480 aaPredicted RBP18.63■□□□□ 0.57
RTN4-204ENST00000357732 FASTKD3Q14CZ7 662 aaKnown RBP18.63■□□□□ 0.57
RTN4-204ENST00000357732 WDR72Q3MJ13 1102 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 NLRP9Q7RTR0 991 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 C4orf33Q8N1A6 199 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 UBR7Q8N806 425 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 ZNF606Q8WXB4 792 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 SPOCK2Q92563 424 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 FAM84AQ96KN4 292 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 IMPG2Q9BZV3 1241 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 ACSS3Q9H6R3 686 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 DCLRE1BQ9H816 532 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 RBAKQ9NYW8 714 aaPredicted RBP18.63■□□□□ 0.57
RTN4-204ENST00000357732 RABGEF1Q9UJ41 708 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 SNCAIPQ9Y6H5 919 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 E7ESA3 106 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 MARK3P27448 753 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 GCKP35557 465 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 SEPT7Q16181 437 aaKnown RBP18.63■□□□□ 0.57
RTN4-204ENST00000357732 KAZNQ674X7 775 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 DNAJC24Q6P3W2 148 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 LONP2Q86WA8 852 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 KIF9Q9HAQ2 790 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 ZMYND8Q9ULU4 1186 aaPredicted RBP18.63■□□□□ 0.57
RTN4-204ENST00000357732 CTDP1Q9Y5B0 961 aaPredicted RBP18.63■□□□□ 0.57
RTN4-204ENST00000357732 IVNS1ABPQ9Y6Y0 642 aa18.63■□□□□ 0.57
RTN4-204ENST00000357732 NEBLO76041 1014 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 TGDSO95455 350 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 IL1BP01584 269 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 CFHP08603 1231 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 KRT4P19013 534 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 ATP6V1C1P21283 382 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 NLRP11P59045 1033 aaKnown RBP18.62■□□□□ 0.57
RTN4-204ENST00000357732 GRM1Q13255 1194 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 PPP1R15BQ5SWA1 713 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 ZFYVE27Q5T4F4 411 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 SPOPLQ6IQ16 392 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 CLNKQ7Z7G1 428 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 LMNTD2Q8IXW0 634 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 TMEM35BQ8NCS4 154 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 ASAP3Q8TDY4 903 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 PYROXD1Q8WU10 500 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 NUDCD1Q96RS6 583 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 MAK16Q9BXY0 300 aaKnown RBP18.62■□□□□ 0.57
RTN4-204ENST00000357732 MAF1Q9H063 256 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 PI4K2BG5E9Z4 385 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 HGSO14964 777 aaPredicted RBP18.62■□□□□ 0.57
RTN4-204ENST00000357732 CCDC22O60826 627 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 STAM2O75886 525 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 ZSCAN5DPP0CG00 497 aa18.62■□□□□ 0.57
RTN4-204ENST00000357732 KCNA2P16389 499 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms