RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 ILF3Q12906 894 aaKnown RBP eCLIP4.86□□□□□ -1.63
SYNE2-203ENST00000357395 MAD2L1Q13257 205 aaPredicted RBP4.86□□□□□ -1.63
SYNE2-203ENST00000357395 TOM1L2Q6ZVM7 507 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 NLRP10Q86W26 655 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 GOLM1Q8NBJ4 401 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 SPIRE2Q8WWL2 714 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 ZNF75CPQ92670 426 aaPredicted RBP4.86□□□□□ -1.63
SYNE2-203ENST00000357395 NOL11Q9H8H0 719 aaKnown RBP4.86□□□□□ -1.63
SYNE2-203ENST00000357395 CLK4Q9HAZ1 481 aaKnown RBP4.86□□□□□ -1.63
SYNE2-203ENST00000357395 SLC8A2Q9UPR5 921 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 CDHR2Q9BYE9 1310 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 FCER2P06734 321 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 MYBL2P10244 700 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 ARL13BQ3SXY8 428 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 SMIM5Q71RC9 77 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 DIS3L2Q8IYB7 885 aaKnown RBP4.86□□□□□ -1.63
SYNE2-203ENST00000357395 DCLK2Q8N568 766 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 CHID1Q9BWS9 393 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 GSTK1Q9Y2Q3 226 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 CCDC85CA6NKD9 419 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 ZNF18P17022 549 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 ACADLP28330 430 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 CYP51A1Q16850 503 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 TMEM132EQ6IEE7 984 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 RDH12Q96NR8 316 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 KCNN2Q9H2S1 579 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 ARPP21Q9UBL0 812 aaPredicted RBP4.86□□□□□ -1.63
SYNE2-203ENST00000357395 ADCY9O60503 1353 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 OPLAHO14841 1288 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 FADS2O95864 444 aaKnown RBP4.86□□□□□ -1.63
SYNE2-203ENST00000357395 MSR1P21757 451 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 GEMIN4P57678 1058 aaKnown RBP4.86□□□□□ -1.63
SYNE2-203ENST00000357395 ZNF829Q3KNS6 432 aaPredicted RBP4.86□□□□□ -1.63
SYNE2-203ENST00000357395 HSD17B12Q53GQ0 312 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 PAPD7Q5XG87 772 aaKnown RBP4.86□□□□□ -1.63
SYNE2-203ENST00000357395 RASSF6Q6ZTQ3 369 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 TMEM17Q86X19 198 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 SNX32Q86XE0 403 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 NDNQ99608 321 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 COMMD8Q9NX08 183 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 NCKIPSDQ9NZQ3 722 aa4.86□□□□□ -1.63
SYNE2-203ENST00000357395 SGK1O00141 431 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 GAS7O60861 476 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 CSDE1O75534 798 aaKnown RBP4.85□□□□□ -1.63
SYNE2-203ENST00000357395 ADNPQ9H2P0 1102 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 SSU72Q9NP77 194 aaKnown RBP4.85□□□□□ -1.63
SYNE2-203ENST00000357395 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.85□□□□□ -1.63
SYNE2-203ENST00000357395 SUGT1Q9Y2Z0 365 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 DCKP27707 260 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 PLCZ1Q86YW0 608 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 ERI1Q8IV48 349 aaKnown RBP4.85□□□□□ -1.63
SYNE2-203ENST00000357395 IQCF2Q8IXL9 164 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 DNAJB8Q8NHS0 232 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 MYDGFQ969H8 173 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 NT5C1BQ96P26 610 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 KDM6AO15550 1401 aaPredicted RBP4.85□□□□□ -1.63
SYNE2-203ENST00000357395 HMGXB3Q12766 1538 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 DNAJB1P25685 340 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 USP11P51784 963 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 NDUFA8P51970 172 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 GPATCH4Q5T3I0 446 aaKnown RBP4.85□□□□□ -1.63
SYNE2-203ENST00000357395 ANKRD40Q6AI12 368 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 ATL1Q8WXF7 558 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 CYP4F12Q9HCS2 524 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 SLC9A2Q9UBY0 812 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 VPS4AQ9UN37 437 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 ARHGEF35A5YM69 484 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 SRGAP2O75044 1071 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 MYL7Q01449 175 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 PUDPQ08623 228 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 KIF22Q14807 665 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 TRMT2AQ8IZ69 625 aaKnown RBP4.85□□□□□ -1.63
SYNE2-203ENST00000357395 ILKAPQ9H0C8 392 aaPredicted RBP4.85□□□□□ -1.63
SYNE2-203ENST00000357395 STK39Q9UEW8 545 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 DUOX2Q9NRD8 1548 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 CCDC189A1A4V9 331 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 NOL4O94818 638 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 ABHD2P08910 425 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 BRAFP15056 766 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 STARP49675 285 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 CAPZA1P52907 286 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 MTFR1Q15390 333 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 CAPN12Q6ZSI9 719 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 CYP4Z2PQ8N1L4 340 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 RNF217Q8TC41 542 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 DEPDC1BQ8WUY9 529 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 RORBQ92753 470 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 RHBDL2Q9NX52 303 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 NPAP1Q9NZP6 1156 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 PEX16Q9Y5Y5 336 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 S100GP29377 79 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 ETV1P50549 477 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 TAGLNQ01995 201 aaKnown RBP4.85□□□□□ -1.63
SYNE2-203ENST00000357395 STX4Q12846 297 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 ALFQ53S48 1182 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 FAM47AQ5JRC9 791 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 AARS2Q5JTZ9 985 aaKnown RBP4.85□□□□□ -1.63
SYNE2-203ENST00000357395 METTL21CQ5VZV1 264 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 FAM47EQ6ZV65 393 aa4.85□□□□□ -1.63
SYNE2-203ENST00000357395 RCOR2Q8IZ40 523 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms