RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 SUSD4Q5VX71 490 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 SDE2Q6IQ49 451 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 OR8H2Q8N162 312 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 PGBD3Q8N328 593 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 ZCCHC7Q8N3Z6 543 aaKnown RBP13.38□□□□□ -0.27
SMC4-202ENST00000357388 SCFD2Q8WU76 684 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 OTUD5Q96G74 571 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 ECSITQ9BQ95 431 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 TDRD3Q9H7E2 651 aaKnown RBP13.38□□□□□ -0.27
SMC4-202ENST00000357388 RWDD3Q9Y3V2 267 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 PTCH1Q13635 1447 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 ASMTLO95671 621 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 MOCS2O96007 188 aaPredicted RBP13.38□□□□□ -0.27
SMC4-202ENST00000357388 LRRC8DQ7L1W4 858 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 TRAPPC11Q7Z392 1133 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 HEATR4Q86WZ0 1026 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 PPIL6Q8IXY8 311 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 ELOA2Q8IYF1 753 aaPredicted RBP13.38□□□□□ -0.27
SMC4-202ENST00000357388 AIFM3Q96NN9 605 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 DEPDC7Q96QD5 511 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 ILKAPQ9H0C8 392 aaPredicted RBP13.38□□□□□ -0.27
SMC4-202ENST00000357388 SYNDIG1Q9H7V2 258 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 GABBR1Q9UBS5 961 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 UBA2Q9UBT2 640 aaPredicted RBP13.38□□□□□ -0.27
SMC4-202ENST00000357388 UTYO14607 1347 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 ZC3H4Q9UPT8 1303 aaKnown RBP13.38□□□□□ -0.27
SMC4-202ENST00000357388 SASH1O94885 1247 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 TNFAIP8O95379 198 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 RRM2P31350 389 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 RGS4P49798 205 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 LRRC74AQ0VAA2 488 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 SPATA2LQ8IUW3 424 aaPredicted RBP13.37□□□□□ -0.27
SMC4-202ENST00000357388 RBBP8NLQ8NC74 664 aaPredicted RBP13.37□□□□□ -0.27
SMC4-202ENST00000357388 SHCBP1Q8NEM2 672 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 CEP44Q9C0F1 390 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 SLC16A4O15374 487 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 MTSS1O43312 755 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 PSTPIP1O43586 416 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 ATP9AO75110 1047 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 TSC22D2O75157 780 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 RAD23AP54725 363 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 ITGA1P56199 1179 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 SESN2P58004 480 aaPredicted RBP13.37□□□□□ -0.27
SMC4-202ENST00000357388 HPCAP84074 193 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 C1DQ13901 141 aaKnown RBP13.37□□□□□ -0.27
SMC4-202ENST00000357388 C16orf72Q14CZ0 275 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 SWSAP1Q6NVH7 229 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 DDX53Q86TM3 631 aaKnown RBP13.37□□□□□ -0.27
SMC4-202ENST00000357388 POLR3FQ9H1D9 316 aaPredicted RBP13.37□□□□□ -0.27
SMC4-202ENST00000357388 CAPZA2P47755 286 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 ATP2C1P98194 919 aaPredicted RBP13.37□□□□□ -0.27
SMC4-202ENST00000357388 COX10Q12887 443 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 SYTL3Q4VX76 610 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 TRIQKQ629K1 86 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 IRGCQ6NXR0 463 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 KRT74Q7RTS7 529 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 CCNJLQ8IV13 435 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 HSPBP1Q9NZL4 362 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 AFF4Q9UHB7 1163 aaKnown RBP13.37□□□□□ -0.27
SMC4-202ENST00000357388 PLEKHA8P1O95397 391 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 TPI1P60174 286 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 DGUOKQ16854 277 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 DUOXA2Q1HG44 320 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 KRT73Q86Y46 540 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 SH3RF3Q8TEJ3 882 aaPredicted RBP13.37□□□□□ -0.27
SMC4-202ENST00000357388 PIGBQ92521 554 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 NMD3Q96D46 503 aaKnown RBP13.37□□□□□ -0.27
SMC4-202ENST00000357388 RMND5AQ9H871 391 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 FAM217BQ9NTX9 383 aaPredicted RBP13.37□□□□□ -0.27
SMC4-202ENST00000357388 ERBB3P21860 1342 aa13.37□□□□□ -0.27
SMC4-202ENST00000357388 ZNF23P17027 643 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 TCN1P20061 433 aaPredicted RBP13.36□□□□□ -0.27
SMC4-202ENST00000357388 SARSP49591 514 aaKnown RBP13.36□□□□□ -0.27
SMC4-202ENST00000357388 EPS8Q12929 822 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 EFHC1Q5JVL4 640 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 ZNF746Q6NUN9 644 aaPredicted RBP13.36□□□□□ -0.27
SMC4-202ENST00000357388 MIEF2Q96C03 454 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 KIF12Q96FN5 646 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 MPP4Q96JB8 637 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 PLEKHA5Q9HAU0 1116 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 PIH1D3Q9NQM4 214 aaKnown RBP13.36□□□□□ -0.27
SMC4-202ENST00000357388 VPS9D1Q9Y2B5 631 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 SFI1A8K8P3 1242 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 F8VZ95 297 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 KLHL41O60662 606 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 C21orf59P57076 290 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 NR1I3Q14994 352 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 ZNF544Q6NX49 715 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 IZUMO2Q6UXV1 221 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 MS4A14Q96JA4 679 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 PPP1R36Q96LQ0 422 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 C9orf72Q96LT7 481 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 RAB6BQ9NRW1 208 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 APEX2Q9UBZ4 518 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 EIF3LQ9Y262 564 aaKnown RBP13.36□□□□□ -0.27
SMC4-202ENST00000357388 EMSYQ7Z589 1322 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 CYP2D7A0A087X1C5 515 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 PIK3R1P27986 724 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 ADORA2BP29275 332 aa13.36□□□□□ -0.27
SMC4-202ENST00000357388 HSD17B3P37058 310 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms